RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ROS1P08922 2347 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 HELZ2Q9BYK8 2649 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 TEX13DA0A0J9YY54 714 aaPredicted RBP12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 OR5B21A6NL26 309 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 F5H0A9 414 aaPredicted RBP12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 COX6B1P14854 86 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 CTRB1P17538 263 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 FPR2P25090 351 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 MST1LQ2TV78 715 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 DMRTC1Q5HYR2 192 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 CTRB2Q6GPI1 263 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 ELP2Q6IA86 826 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 MUC15Q8N387 334 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 SCGB3A2Q96PL1 93 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 HIST1H2AAQ96QV6 131 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 ARFGEF3Q5TH69 2177 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 PKDREJQ9NTG1 2253 aa12.56□□□□□ -0.4
TM9SF1-202ENST00000396854 PQLC2LA1A4F0 135 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 CRTAPO75718 401 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 SFT2D2O95562 160 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 APOC3P02656 99 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 PTGFRP43088 359 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 RBP2P50120 134 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 OR8G1Q15617 311 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 SWI5Q1ZZU3 235 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 FBXL14Q8N1E6 418 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 OR5AP2Q8NGF4 316 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 PSMG3-AS1Q96PY0 264 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 IGKV1-27A0A075B6S5 117 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 C13orf42A0A1B0GVH6 325 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 A0A1W2PP11 408 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 FOXI3A8MTJ6 420 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 H0YL77 283 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 FGF16O43320 207 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 ADH4P08319 380 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 GNG3P63215 75 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 TLE4Q04727 773 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 OR10AD1Q8NGE0 317 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 RNF126Q9BV68 326 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 RTL8AQ9BWD3 113 aa12.55□□□□□ -0.4
TM9SF1-202ENST00000396854 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 FAM230AA0A1W2PPH8 454 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 RAB19A4D1S5 217 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 LYL1P12980 280 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 PGAM2P15259 253 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 NPY4RP50391 375 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 FAM76BQ5HYJ3 339 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 DCUN1D4Q92564 292 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 UTP20O75691 2785 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-202ENST00000396854 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 ZNF732B4DXR9 585 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 DANCRP0C864 163 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 AMY2BP19961 511 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 GPM6AP51674 278 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 MTCP1P56278 107 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 TAS2R46P59540 309 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 MZT1Q08AG7 82 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 DTX2Q86UW9 622 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 DIRC2Q96SL1 478 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 CXXC4Q9H2H0 198 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 PCDHB10Q9UN67 800 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 TOR1AO14656 332 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 PTBP3O95758 552 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 CD200P41217 278 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 SUPT4H1P63272 117 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 OR51T1Q8NGJ9 327 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 CBLN4Q9NTU7 201 aa12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 USP9YO00507 2555 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-202ENST00000396854 TANC2Q9HCD6 1990 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms