RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RAB29O14966 203 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 NDUFB3O43676 98 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 LANCL1O43813 399 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 GAPDHP04406 335 aaKnown RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 M6PRP20645 277 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 F2RP25116 425 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CD79BP40259 229 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PRRX1P54821 245 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 RPS11P62280 158 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 C1orf185Q5T7R7 199 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR2T2Q6IF00 324 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 Q96M66 194 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 NKX6-2Q9C056 277 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 KCNK7Q9Y2U2 307 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MEIS3P1A6NDR6 274 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PMP2P02689 132 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 GNB3P16520 340 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 IGFBP3P17936 291 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CLLU1Q5K131 121 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 STXBP6Q8NFX7 210 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SPACA5Q96QH8 159 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 DPCDQ9BVM2 203 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 A0A1B0GTH9 108 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CDIPTO14735 213 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 VHLLQ6RSH7 139 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 DOLPP1Q86YN1 238 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 POM121L2Q96KW2 1035 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TCEAL7Q9BRU2 100 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CHRDL1Q9BU40 450 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MIXL1Q9H2W2 232 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PLEKHA3Q9HB20 300 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 V9GYS6 101 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 NKX2-8O15522 239 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TGOLN2O43493 480 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 ACSF3Q4G176 576 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF561Q8N587 486 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 FAM89BQ8N5H3 189 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TAAR6Q96RI8 345 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 FSCN3Q9NQT6 498 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MSRB2Q9Y3D2 182 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SYNGR3O43761 229 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 APOC3P02656 99 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 NDUFB7P17568 137 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 NFYBP25208 207 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SLC9A3R2Q15599 337 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 LIAT1Q6ZQX7 453 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 LRRTM1Q86UE6 522 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SPSB4Q96A44 273 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CCDC120Q96HB5 630 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MBD3L4A6NDZ8 208 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MBD3L3A6NE82 208 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MBD3L5A6NJ08 208 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 BRS3P32247 399 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR3A4PP47883 348 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 DEFA5Q01523 94 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 LGALSLQ3ZCW2 172 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SEZ6L2Q6UXD5 910 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PIP4P1Q86T03 277 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MBD3L2Q8NHZ7 208 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 FAM57AQ8TBR7 257 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CNTNAP3Q9BZ76 1288 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OMGP23515 440 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 THBS3P49746 956 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 KRBOX4Q5JUW0 171 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PRSS54Q6PEW0 395 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 BTLAQ7Z6A9 289 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 FAAP24Q9BTP7 215 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 KIAA1456Q9P272 454 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TNRC18O15417 2968 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TNRC6BQ9UPQ9 1833 aaKnown RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 ZSCAN5BA6NJL1 495 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CEBPZOSA8MTT3 80 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 F8W036 122 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 H0Y980 276 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 GOSR1O95249 250 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 CLDN1O95832 211 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 ENDOGQ14249 297 aaKnown RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR10X1Q8NGY0 326 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 RNF7Q9UBF6 113 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 IGSF10Q6WRI0 2623 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 PTPRBP23467 1997 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 hCG_38984A0A1B0GV85 526 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 C9orf170A2RU37 121 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 MPZL1O95297 269 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TGFBR1P36897 503 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 ASCL1P50553 236 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 RAB5BP61020 215 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 VASH2Q86V25 355 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR5M9Q8NGP3 310 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR10K1Q8NGX5 313 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR8U1Q8NH10 309 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 OR51H1Q8NH63 302 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 GPR137Q96N19 417 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SCNM1Q9BWG6 230 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 SEBOXQ9HB31 216 aaPredicted RBP2.93□□□□□ -1.94
VPS13C-203ENST00000395896 TRBV23-1A0A0A0MS06 115 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 M0QYG6 137 aa2.93□□□□□ -1.94
VPS13C-203ENST00000395896 H2AFB1P0C5Y9 115 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms