RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 BOD1Q96IK1 185 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 USB1Q9BQ65 265 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 FRYQ5TBA9 3013 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 RCC1P18754 421 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 P2RY1P47900 373 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 RAB13P51153 203 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 SRSF6Q13247 344 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 DHRS7BQ6IAN0 325 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 C20orf204Q6ZNR8 217 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF818PQ6ZRF7 136 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 DLL3Q9NYJ7 618 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 SPAARA0A1B0GVQ0 90 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 HSPB6O14558 160 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 GPR137BO60478 399 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 RHBDL1O75783 438 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 CELA3BP08861 270 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 AKR1D1P51857 326 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 UBE2NP61088 152 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 PPP1CBP62140 327 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 GABRA6Q16445 453 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 SPATA46Q5T0L3 261 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 Q6P435 159 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 INO80CQ6PI98 192 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 IGF2-ASQ6U949 168 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 Q6ZT83 130 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 GAPTQ8N292 157 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 OR4A4PQ8NGN8 299 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 SECTM1Q8WVN6 248 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 C12orf57Q99622 126 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 RTL8AQ9BWD3 113 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 TREM2Q9NZC2 230 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 POMT1Q9Y6A1 747 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 PRRC2CQ9Y520 2896 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 AQP7O14520 342 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 PVALBP20472 110 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 ERVK11-1P61568 191 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 C17orf78Q8N4C9 275 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 DMBX1Q8NFW5 382 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 BIN3Q9NQY0 253 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 COA4Q9NYJ1 87 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 ZDHHC8Q9ULC8 765 aa13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 CARHSP1Q9Y2V2 147 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-207ENST00000394801 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 HS3ST1O14792 307 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 RAC2P15153 192 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 WT1P19544 449 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 WDR86Q86TI4 376 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 Q8IYB0 196 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 SELENOHQ8IZQ5 122 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 SPAG16Q8N0X2 631 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 RDH5Q92781 318 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 C11orf1Q9H5F2 150 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 PLA2G2EQ9NZK7 142 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 ESPL1Q14674 2120 aa13.04□□□□□ -0.32
UBE2D3-207ENST00000394801 TRAV17A0A0B4J275 112 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 CLEC18AA5D8T8 446 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 ADCYAP1P18509 176 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 UCP1P25874 307 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 BLOC1S1P78537 153 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 CLEC18CQ8NCF0 446 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 CABLES2Q9BTV7 478 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 PARP11Q9NR21 331 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 NKX2-6A6NCS4 301 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 DEGS1O15121 323 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF324BQ6AW86 544 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 SCCPDHQ8NBX0 429 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 OR2W1Q9Y3N9 320 aa13.03□□□□□ -0.32
UBE2D3-207ENST00000394801 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 NPIPB11E5RHQ5 1161 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 F8W036 122 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 LYZL6O75951 148 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 WISP2O76076 250 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 LPAR6P43657 344 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 CAV2P51636 162 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 UCP2P55851 309 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 HLA-DRB3P79483 266 aa13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 SRSF3P84103 164 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-207ENST00000394801 BTNL8Q6UX41 500 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms