RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NEK7Q8TDX7 302 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CCDC107Q8WV48 283 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CORO2AQ92828 525 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 SSX3Q99909 188 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CLEC7AQ9BXN2 247 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 DPAGT1Q9H3H5 408 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 GAL3ST2Q9H3Q3 398 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CALYQ9NYX4 217 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 VPREB3Q9UKI3 123 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 AK6Q9Y3D8 172 aaKnown RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 HILPDAQ9Y5L2 63 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 POMT1Q9Y6A1 747 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 DOCK11Q5JSL3 2073 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A1W2PPE3 182 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 SHISA3A0PJX4 238 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 FUOMA2VDF0 154 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 SMIM30A4D0T7 59 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 MEGF11A6BM72 1044 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 BTBD17A6NE02 478 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A8PA6NJQ4 464 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 CHST1O43916 411 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF780AO75290 641 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 CRYBA1P05813 215 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 VSIG8P0DPA2 414 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 SRMP19623 302 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 CD24P25063 80 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 PSMB9P28065 219 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 GNG10P50151 68 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 CLDN12P56749 244 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 UNC119Q13432 240 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 RBM39Q14498 530 aaKnown RBP6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 MPV17LQ2QL34 196 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 FBLN7Q53RD9 439 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 HIST2H2BDQ6DRA6 164 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 SIGIRRQ6IA17 410 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 RAB12Q6IQ22 244 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 HEPN1Q6WQI6 88 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM219Q86XT9 240 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 ABHD12Q8N2K0 398 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR4P4Q8NGL7 312 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 NDNFQ8TB73 568 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 PIFOQ8TCI5 191 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 PHYHIPQ92561 330 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 THRSPQ92748 146 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 KIRREL1Q96J84 757 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 UQCC2Q9BRT2 126 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 NICN1Q9BSH3 213 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 BARHL1Q9BZE3 327 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLITRK2Q9H156 845 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 Q9H521 79 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 IFT22Q9H7X7 185 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 ISYNA1Q9NPH2 558 aa6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 RCC2Q9P258 522 aaKnown RBP6.2□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A0A6YYD4 124 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 IGHV3-43A0A0B4J1X8 118 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 KBTBD11-OT1A0A1B0GTJ5 212 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM30CPA0ZSE6 113 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 UBE2QL1A1L167 161 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF729A6NN14 1252 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLC22A1O15245 554 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 IL1AP01583 271 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 CGB3P0DN86 165 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 CGB7P0DN87 165 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 IGHV3-43DP0DP04 118 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 HTR2CP28335 458 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 GABRA5P31644 462 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR10A3P58181 314 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 KRTAP10-3P60369 221 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 FOXL1Q12952 345 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 PLA2G7Q13093 441 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 GPR176Q14439 515 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 HES5Q5TA89 166 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 GLT8D1Q68CQ7 371 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 CCBE1Q6UXH8 406 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 Q6ZSV7 163 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 LINC00596Q86U02 117 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 CDH26Q8IXH8 852 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 PRR18Q8N4B5 295 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR4K15Q8NH41 348 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR5R1Q8NH85 324 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 RBMXL1Q96E39 390 aaKnown RBP6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 Q96M66 194 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 MEGF9Q9H1U4 602 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 PLGRKTQ9HBL7 147 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 NDUFB11Q9NX14 153 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 ETAA1Q9NY74 926 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 TAS2R3Q9NYW6 316 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 IDI2-AS1Q9NZ38 188 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR6C3Q9NZP0 311 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 SIGLEC9Q9Y336 463 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 TBL2Q9Y4P3 447 aaKnown RBP6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 PEX16Q9Y5Y5 336 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A0B4J203 849 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 C12orf77C9JDV5 145 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 MCRIP1C9JLW8 97 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms