RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SPACA1Q9HBV2 294 aa13.24□□□□□ -0.29
SNRPB-201ENST00000381342 DAPK2Q9UIK4 370 aa13.24□□□□□ -0.29
SNRPB-201ENST00000381342 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
SNRPB-201ENST00000381342 MEIKINA0A087WXM9 373 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 TRGV10A0A0A0MS01 117 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 RNASEK-C17orf49H0YIS7 233 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 LDLRAD4O15165 306 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 CHATP28329 748 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 EFNB2P52799 333 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 NCS1P62166 190 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 C1orf122Q6ZSJ8 110 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 BCL6BQ8N143 479 aaPredicted RBP13.23□□□□□ -0.29
SNRPB-201ENST00000381342 C11orf42Q8N5U0 333 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 BATF3Q9NR55 127 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
SNRPB-201ENST00000381342 UBE2J1Q9Y385 318 aaPredicted RBP13.23□□□□□ -0.29
SNRPB-201ENST00000381342 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
SNRPB-201ENST00000381342 TRAV39A0A0B4J263 110 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 IGHV1-69DA0A0B4J2H0 117 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PRD5 423 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PRF3 423 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PRM7 423 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 C17orf98A8MV24 154 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 MCRIP1C9JLW8 97 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 CLPXO76031 633 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 IGHV1-69P01742 117 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 FUT3P21217 361 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 PRTN3P24158 256 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 VBP1P61758 197 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 PAX5Q02548 391 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 PRAMEF5Q5TYX0 476 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 HCP5Q6MZN7 132 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 PNKDQ8N490 385 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
SNRPB-201ENST00000381342 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 GCDHQ92947 438 aaPredicted RBP13.22□□□□□ -0.29
SNRPB-201ENST00000381342 TNFRSF14Q92956 283 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 URM1Q9BTM9 101 aaKnown RBP13.22□□□□□ -0.29
SNRPB-201ENST00000381342 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 UNKLQ9H9P5 680 aaKnown RBP13.22□□□□□ -0.29
SNRPB-201ENST00000381342 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
SNRPB-201ENST00000381342 hCG_1809904A0A1W2PP81 198 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PPE2 198 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PR64 198 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 A0A1W2PRV1 198 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 SOCS1O15524 211 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 GABARAPO95166 117 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 RBP4P02753 201 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
SNRPB-201ENST00000381342 COX7A1P24310 79 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 BLVRBP30043 206 aaPredicted RBP13.21□□□□□ -0.29
SNRPB-201ENST00000381342 RANBP1P43487 201 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 RBM39Q14498 530 aaKnown RBP13.21□□□□□ -0.29
SNRPB-201ENST00000381342 NCR3LG1Q68D85 454 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 SLC35E4Q6ICL7 350 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 ZNF497Q6ZNH5 498 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 C6orf201Q7Z4U5 140 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 LGALS14Q8TCE9 139 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 CORO2AQ92828 525 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 NEDD4LQ96PU5 975 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 SULT4A1Q9BR01 284 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 GAL3ST2Q9H3Q3 398 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 OR6C3Q9NZP0 311 aa13.21□□□□□ -0.29
SNRPB-201ENST00000381342 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 MMP23AO75900 390 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 PAHP00439 452 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 IGHV1-8P0DP01 117 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 RPS19P39019 145 aaKnown RBP13.2□□□□□ -0.3
SNRPB-201ENST00000381342 GDNFP39905 211 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 SERPINB10P48595 397 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 VEGFCP49767 419 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 IDNKQ5T6J7 187 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 BAIAP2L2Q6UXY1 529 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 SIGLECL1Q8N7X8 197 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 TAS2R3Q9NYW6 316 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 CALYQ9NYX4 217 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 RAB22AQ9UL26 194 aa13.2□□□□□ -0.3
SNRPB-201ENST00000381342 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
SNRPB-201ENST00000381342 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
SNRPB-201ENST00000381342 IL1AP01583 271 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 GLAP06280 429 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 RAB6AP20340 208 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 OMGP23515 440 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 CDK2P24941 298 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 SSTR5P35346 364 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 BPIFB3P59826 476 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 BAMBIQ13145 260 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 CTF1Q16619 201 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 C17orf58Q2M2W7 97 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms