RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 MRPS28Q9Y2Q9 187 aaKnown RBP12.38□□□□□ -0.43
RAB4B-202ENST00000378307 MINOS1-NBL1R4GNA1 71 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 A0A087X0M5 115 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 A0A1B0GX30 115 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 SC5DO75845 299 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 CRHBPP24387 322 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 CD24P25063 80 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 CD34P28906 385 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 KIR2DS4P43632 304 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 PAX5Q02548 391 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 Q6ZS46 218 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 TMEM104Q8NE00 496 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 BANF2Q9H503 90 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 CALYQ9NYX4 217 aa12.37□□□□□ -0.43
RAB4B-202ENST00000378307 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 GTF2F2P13984 249 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 NFYBP25208 207 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 HTR1DP28221 377 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 GABRA5P31644 462 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 SSTR5P35346 364 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 MAP2K4P45985 399 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 DYNLT3P51808 116 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 EFNB2P52799 333 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
RAB4B-202ENST00000378307 LTC4SQ16873 150 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 ATAD3CQ5T2N8 411 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 LIPKQ5VXJ0 399 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 FAM53AQ6NSI3 398 aaPredicted RBP12.36□□□□□ -0.43
RAB4B-202ENST00000378307 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 LINC00574Q9H8X3 128 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 ABCB10Q9NRK6 738 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 IDI2-AS1Q9NZ38 188 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 TPRKBQ9Y3C4 175 aa12.36□□□□□ -0.43
RAB4B-202ENST00000378307 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 RGS10O43665 173 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
RAB4B-202ENST00000378307 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 IL1AP01583 271 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 KCNJ3P48549 501 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 SIGIRRQ6IA17 410 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 LINC00596Q86U02 117 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 UBALD1Q8TB05 177 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 ZNF596Q8TC21 504 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 TMEM203Q969S6 136 aa12.35□□□□□ -0.43
RAB4B-202ENST00000378307 RCC2Q9P258 522 aaKnown RBP12.35□□□□□ -0.43
RAB4B-202ENST00000378307 TOR1AO14656 332 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 MT-ND4P03905 459 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 MGMTP16455 207 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 MAPK3P27361 379 aaPredicted RBP12.34□□□□□ -0.43
RAB4B-202ENST00000378307 RPS25P62851 125 aaKnown RBP12.34□□□□□ -0.43
RAB4B-202ENST00000378307 BLCAPP62952 87 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 RBM39Q14498 530 aaKnown RBP12.34□□□□□ -0.43
RAB4B-202ENST00000378307 OR10K2Q6IF99 312 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 LIAT1Q6ZQX7 453 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 OR4C13Q8NGP0 309 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 CCDC90BQ9GZT6 254 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 KCNK15Q9H427 330 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 TCF7L1Q9HCS4 588 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 RAB18Q9NP72 206 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 SERTAD4Q9NUC0 356 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 PSG11Q9UQ72 335 aa12.34□□□□□ -0.43
RAB4B-202ENST00000378307 A0A1W2PPE3 182 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 C15orf65H3BRN8 121 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 J3QR06 171 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 F2RL2O00254 374 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 CRTAPO75718 401 aaPredicted RBP12.33□□□□□ -0.44
RAB4B-202ENST00000378307 UCHL1P09936 223 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 HSMCR30P0CW71 290 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 SRMP19623 302 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 GPR50Q13585 617 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 TPBGQ13641 420 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 GPR176Q14439 515 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
RAB4B-202ENST00000378307 TPTE2P1Q5T6R2 138 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 ZNF497Q6ZNH5 498 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 PRSS48Q7RTY5 328 aa12.33□□□□□ -0.44
RAB4B-202ENST00000378307 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms