RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 NEURL2Q9BR09 285 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 CEBPEQ15744 281 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 TPRX1Q8N7U7 411 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 SLC26A10Q8NG04 563 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 NHSQ6T4R5 1651 aa12.41□□□□□ -0.42
TRIM13-202ENST00000378182 BTG1P62324 171 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 TTRP02766 147 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 ADIPOQQ15848 244 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 KLHDC1Q8N7A1 406 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 GCGP01275 180 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 CD96P40200 585 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 BCL2L10Q9HD36 194 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 A0A0B4J293 547 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
TRIM13-202ENST00000378182 GZMKP49863 264 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 SNRNP40Q96DI7 357 aaKnown RBP12.4□□□□□ -0.42
TRIM13-202ENST00000378182 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
TRIM13-202ENST00000378182 SCN8AQ9UQD0 1980 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 SLC17A2O00624 439 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 ERVFRD-1P60508 538 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 OR2D3Q8NGH3 330 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 ZNF707Q96C28 371 aaPredicted RBP12.4□□□□□ -0.43
TRIM13-202ENST00000378182 ZG16BQ96DA0 208 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 C19orf43Q9BQ61 176 aa12.4□□□□□ -0.43
TRIM13-202ENST00000378182 A0A1B0GTL3 188 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 DRD3P35462 400 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 TGIF1Q15583 401 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 SMRP1Q8NCR6 262 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 RSG1Q9BU20 258 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
TRIM13-202ENST00000378182 DNAJC13O75165 2243 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 CTLA4P16410 223 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 ANKRD55Q3KP44 614 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 MOGAT2Q3SYC2 334 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 PDCD6O75340 191 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 POLR2GP62487 172 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM13-202ENST00000378182 SSX1Q16384 188 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 OR1L6Q8NGR2 347 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 CLDN14O95500 239 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 CLDN18P56856 261 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 C11orf87Q6NUJ2 197 aa12.39□□□□□ -0.43
TRIM13-202ENST00000378182 METTL1Q9UBP6 276 aaKnown RBP12.39□□□□□ -0.43
TRIM13-202ENST00000378182 MFSD2BA6NFX1 497 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 FCARP24071 287 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 ISL1P61371 349 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 LINC01560Q8TB33 94 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 ATAD5Q96QE3 1844 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 A0A1B0GU03 582 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 SCGB1A1P11684 91 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 OR2V2Q96R30 315 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 PLAUP00749 431 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 SF3B6Q9Y3B4 125 aaKnown RBP12.38□□□□□ -0.43
TRIM13-202ENST00000378182 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 BCL2L11O43521 198 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 CHST1O43916 411 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 TBX19O60806 448 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
TRIM13-202ENST00000378182 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 DUSP15Q9H1R2 295 aaPredicted RBP12.38□□□□□ -0.43
TRIM13-202ENST00000378182 AKIRIN1Q9H9L7 192 aaPredicted RBP12.38□□□□□ -0.43
TRIM13-202ENST00000378182 EVX1P49640 407 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 YAE1D1Q9NRH1 226 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 C9orf170A2RU37 121 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 ZNF502Q8TBZ5 544 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 OR4C12Q96R67 309 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 TMED3Q9Y3Q3 217 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
TRIM13-202ENST00000378182 PTPRZ1P23471 2315 aaPredicted RBP12.38□□□□□ -0.43
TRIM13-202ENST00000378182 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
TRIM13-202ENST00000378182 CCKARP32238 428 aa12.37□□□□□ -0.43
TRIM13-202ENST00000378182 RNF212Q495C1 297 aa12.37□□□□□ -0.43
TRIM13-202ENST00000378182 FAM53AQ6NSI3 398 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms