RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ZNF329Q86UD4 541 aa14.66□□□□□ -0.06
HDAC6-202ENST00000376610 MRPL41Q8IXM3 137 aaKnown RBP14.66□□□□□ -0.06
HDAC6-202ENST00000376610 OR10A7Q8NGE5 316 aa14.66□□□□□ -0.06
HDAC6-202ENST00000376610 LEAP2Q969E1 77 aa14.66□□□□□ -0.06
HDAC6-202ENST00000376610 ISG20L2Q9H9L3 353 aaKnown RBP14.66□□□□□ -0.06
HDAC6-202ENST00000376610 FAM118AQ9NWS6 357 aa14.66□□□□□ -0.06
HDAC6-202ENST00000376610 ZMAT5Q9UDW3 170 aaKnown RBP14.66□□□□□ -0.06
HDAC6-202ENST00000376610 PSG11Q9UQ72 335 aa14.66□□□□□ -0.06
HDAC6-202ENST00000376610 TRAV24A0A0B4J272 114 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 CD2P06729 351 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 CGB3P0DN86 165 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 CGB7P0DN87 165 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 HOXD3P31249 432 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-202ENST00000376610 GNG10P50151 68 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 KRTAP10-11P60412 298 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 RAB40BQ12829 278 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 HNF4GQ14541 408 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 UTF1Q5T230 341 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 FOXRED2Q8IWF2 684 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 COMMD1Q8N668 190 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 C5orf56Q8N8D9 126 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 RFESDQ8TAC1 157 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 MRGPRDQ8TDS7 321 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 PDCD1LG2Q9BQ51 273 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 LINC00574Q9H8X3 128 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 ZFP57Q9NU63 452 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 ERVK13-1Q9NX77 482 aa14.65□□□□□ -0.06
HDAC6-202ENST00000376610 NBEAL2Q6ZNJ1 2754 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 A0A1W2PPI3 338 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 WI2-2373I1.2A0A1W2PRP0 233 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 IGKV1D-33P01593 117 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 IGKV1-33P01594 117 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 THBS3P49746 956 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 PAX5Q02548 391 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 CD69Q07108 199 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 EGFEM1PQ0D2K5 195 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 RSBN1Q5VWQ0 802 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-202ENST00000376610 ZFP1Q6P2D0 407 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 UNQ9370/PRO34162Q6UXP9 181 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 OR2W3Q7Z3T1 314 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 SLC35E3Q7Z769 313 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 NOL4LQ96MY1 436 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-202ENST00000376610 S100A13Q99584 98 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 AASSQ9UDR5 926 aa14.64□□□□□ -0.07
HDAC6-202ENST00000376610 NPIPB11E5RHQ5 1161 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 GABRPO00591 440 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 HTR3BO95264 441 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 CSTBP04080 98 aaKnown RBP14.63□□□□□ -0.07
HDAC6-202ENST00000376610 SSTR5P35346 364 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 PIGYQ3MUY2 71 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 CBR4Q8N4T8 237 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 OR10K1Q8NGX5 313 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 PLPPR1Q8TBJ4 325 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 DPCDQ9BVM2 203 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-202ENST00000376610 JAM3Q9BX67 310 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 AMBNQ9NP70 447 aa14.63□□□□□ -0.07
HDAC6-202ENST00000376610 RPL36Q9Y3U8 105 aaKnown RBP14.63□□□□□ -0.07
HDAC6-202ENST00000376610 E9PI62 339 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 CCRL2O00421 344 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 HSD17B6O14756 317 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 OR7C1O76099 320 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-202ENST00000376610 GAPDHP04406 335 aaKnown RBP14.62□□□□□ -0.07
HDAC6-202ENST00000376610 GZMHP20718 246 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 MYCNOSP40205 109 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 SOX2P48431 317 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 PPP3R1P63098 170 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 KLHL22Q53GT1 634 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 ETV3LQ6ZN32 361 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 C8orf86Q6ZUL3 223 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 MOB3BQ86TA1 216 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 SUMF2Q8NBJ7 301 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 KLHL30-AS1Q8NEE0 82 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 OR51A2Q8NGJ7 313 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 GPR148Q8TDV2 347 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 GON7Q9BXV9 100 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 METTL9Q9H1A3 318 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 PAK1IP1Q9NWT1 392 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-202ENST00000376610 FAM53CQ9NYF3 392 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 ST3GAL6Q9Y274 331 aa14.62□□□□□ -0.07
HDAC6-202ENST00000376610 TMEM30CPA0ZSE6 113 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 NCBP2LA6PVI3 153 aaKnown RBP14.61□□□□□ -0.07
HDAC6-202ENST00000376610 IGHG2P01859 326 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 GABRB1P18505 474 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 IL3RAP26951 378 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 ZNF816Q0VGE8 651 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-202ENST00000376610 DIAPH2-AS1Q14236 149 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 ZNF695Q8IW36 515 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 C10orf67Q8IYJ2 551 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 Q8NFD4 153 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 RHOXF1Q8NHV9 184 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 C9orf16Q9BUW7 83 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 LINC00527Q9UJ94 153 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 ING4Q9UNL4 249 aa14.61□□□□□ -0.07
HDAC6-202ENST00000376610 TENM3Q9P273 2699 aa14.6□□□□□ -0.07
HDAC6-202ENST00000376610 COL7A1Q02388 2944 aa14.6□□□□□ -0.07
HDAC6-202ENST00000376610 A0A1W2PPE3 182 aa14.6□□□□□ -0.07
HDAC6-202ENST00000376610 AP4M1O00189 453 aa14.6□□□□□ -0.07
HDAC6-202ENST00000376610 CDRT1O95170 752 aa14.6□□□□□ -0.07
HDAC6-202ENST00000376610 GP2P55259 537 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms