RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 FAM90A18PA6NE21 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A16PA6NEW6 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A20PA6NIJ5 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A9PA6NNJ1 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A12PA8MX19 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A5PA8MXJ8 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 SLC33A1O00400 549 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-207ENST00000376497 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
CLCN6-207ENST00000376497 CCDC159P0C7I6 412 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A15PP0C7V4 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A13PP0C7W8 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A14PP0C7W9 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 FAM90A24PP0C7X0 464 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 ZNF44P15621 663 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 OR3A4PP47883 348 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 HSPA13P48723 471 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 PRRX1P54821 245 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 AQP4P55087 323 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 CD69Q07108 199 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 ZNF485Q8NCK3 441 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 OR51D1Q8NGF3 324 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 DPF1Q92782 380 aa12.14□□□□□ -0.47
CLCN6-207ENST00000376497 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
CLCN6-207ENST00000376497 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 TOR1AO14656 332 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 OGG1O15527 345 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 CDRT1O95170 752 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 CSN2P05814 226 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 MNDAP41218 407 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 THBS3P49746 956 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLCN6-207ENST00000376497 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 CCDC144NLQ6NUI1 221 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 SAXO1Q8IYX7 474 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
CLCN6-207ENST00000376497 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 RAB26Q9ULW5 256 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 HSPE1-MOB4S4R3N1 261 aa12.13□□□□□ -0.47
CLCN6-207ENST00000376497 NBEAL2Q6ZNJ1 2754 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 TRAV24A0A0B4J272 114 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 A0A1W2PP11 408 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 ODAMA1E959 279 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-207ENST00000376497 FAM106CPP0CH98 169 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 RAB3AP20336 220 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 DCKP27707 260 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 PTGFRP43088 359 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
CLCN6-207ENST00000376497 DCTN2Q13561 401 aaKnown RBP12.12□□□□□ -0.47
CLCN6-207ENST00000376497 C17orf58Q2M2W7 97 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
CLCN6-207ENST00000376497 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 TMEM106AQ96A25 262 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 FAM192AQ9GZU8 254 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
CLCN6-207ENST00000376497 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 A0A1W2PPK0 400 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 DEGS1O15121 323 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 CGB3P0DN86 165 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 CGB7P0DN87 165 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 SLC6A1P30531 599 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 CAPGP40121 348 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 MYCNOSP40205 109 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 ST3GAL4Q11206 333 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
CLCN6-207ENST00000376497 KRBOX4Q5JUW0 171 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 TTC23Q5W5X9 447 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 DMKNQ6E0U4 476 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-207ENST00000376497 ZNF329Q86UD4 541 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 CHST4Q8NCG5 386 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 OR9G1Q8NH87 305 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 PLPPR1Q8TBJ4 325 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 GHSRQ92847 366 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 TMEM80Q96HE8 168 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 PGLYRP3Q96LB9 341 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 GPER1Q99527 375 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 BABAM2Q9NXR7 383 aa12.11□□□□□ -0.47
CLCN6-207ENST00000376497 EXOSC1Q9Y3B2 195 aaKnown RBP12.11□□□□□ -0.47
CLCN6-207ENST00000376497 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
CLCN6-207ENST00000376497 DENRO43583 198 aaKnown RBP12.1□□□□□ -0.47
CLCN6-207ENST00000376497 HTR3BO95264 441 aa12.1□□□□□ -0.47
CLCN6-207ENST00000376497 C21orf33P30042 268 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-207ENST00000376497 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
CLCN6-207ENST00000376497 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
CLCN6-207ENST00000376497 TMPRSS11AQ6ZMR5 421 aa12.1□□□□□ -0.47
CLCN6-207ENST00000376497 AHSA2Q719I0 299 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms