RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TRAV39A0A0B4J263 110 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 TCRBV4S1A1TA0A5B7 111 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A18PA6NE21 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A16PA6NEW6 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A20PA6NIJ5 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A12PA8MX19 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A5PA8MXJ8 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 OGG1O15527 345 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 IL1AP01583 271 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 CSTBP04080 98 aaKnown RBP11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A15PP0C7V4 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A13PP0C7W8 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A14PP0C7W9 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 FAM90A24PP0C7X0 464 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 ZNF93P35789 620 aaPredicted RBP11.34□□□□□ -0.59
NELFE-201ENST00000375425 KCNJ3P48549 501 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 PPP3R1P63098 170 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 PAX5Q02548 391 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 SUMF2Q8NBJ7 301 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 ORAI1Q96D31 301 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 DPCDQ9BVM2 203 aaPredicted RBP11.34□□□□□ -0.59
NELFE-201ENST00000375425 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.34□□□□□ -0.59
NELFE-201ENST00000375425 CLEC2DQ9UHP7 191 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 ZNF281Q9Y2X9 895 aa11.34□□□□□ -0.59
NELFE-201ENST00000375425 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 OR7C1O76099 320 aaPredicted RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 LALBAP00709 142 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 BDKRB2P30411 391 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 SSTR5P35346 364 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 LRRC36Q1X8D7 754 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 C9orf152Q5JTZ5 239 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 OR52N1Q8NH53 320 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 SGCDQ92629 289 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 TOMM40LQ969M1 308 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 S100A13Q99584 98 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 PCDHB16Q9NRJ7 776 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
NELFE-201ENST00000375425 DIMT1Q9UNQ2 313 aaKnown RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 TSSC4Q9Y5U2 329 aaPredicted RBP11.33□□□□□ -0.6
NELFE-201ENST00000375425 IRGMA1A4Y4 181 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 M0QZK8 103 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
NELFE-201ENST00000375425 PF4V1P10720 104 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 MYL12AP19105 171 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 SERPINA2P20848 420 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 GNG10P50151 68 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
NELFE-201ENST00000375425 MADCAM1Q13477 382 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 Q6ZPA2 131 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 DRAM1Q8N682 238 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 CYGBQ8WWM9 190 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 GHSRQ92847 366 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 MYDGFQ969H8 173 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 TMEM80Q96HE8 168 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
NELFE-201ENST00000375425 PAK1IP1Q9NWT1 392 aaPredicted RBP11.32□□□□□ -0.6
NELFE-201ENST00000375425 IGLL1P15814 213 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
NELFE-201ENST00000375425 CD33P20138 364 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 GZMHP20718 246 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 RIPK1Q13546 671 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 HES1Q14469 280 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 TTC23Q5W5X9 447 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 DMKNQ6E0U4 476 aaPredicted RBP11.31□□□□□ -0.6
NELFE-201ENST00000375425 SLC16A12Q6ZSM3 486 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 ZNF184Q99676 751 aaPredicted RBP11.31□□□□□ -0.6
NELFE-201ENST00000375425 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
NELFE-201ENST00000375425 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 HSPE1-MOB4S4R3N1 261 aa11.31□□□□□ -0.6
NELFE-201ENST00000375425 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 A0A1W2PP11 408 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 A0A1W2PPE3 182 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 ZNF780AO75290 641 aaPredicted RBP11.3□□□□□ -0.6
NELFE-201ENST00000375425 RAB7AP51149 207 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
NELFE-201ENST00000375425 HNF4GQ14541 408 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 SLC22A6Q4U2R8 563 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 ATAD3CQ5T2N8 411 aa11.3□□□□□ -0.6
NELFE-201ENST00000375425 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms