RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TECTBQ96PL2 329 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 S100A13Q99584 98 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PDCD10Q9BUL8 212 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PECRQ9BY49 303 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 LINC00470Q9BZP3 86 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 NMES1Q9C002 83 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 BANF2Q9H503 90 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 CHD8Q9HCK8 2581 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RAB18Q9NP72 206 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SDHAF2Q9NX18 166 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 P4HTMQ9NXG6 502 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RASL12Q9NYN1 266 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RDH8Q9NYR8 311 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 IL36GQ9NZH8 169 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ZNF230Q9UIE0 474 aaPredicted RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 BOKQ9UMX3 212 aaPredicted RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 PIGLQ9Y2B2 252 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 MUC6Q6W4X9 2439 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 FREM1Q5H8C1 2179 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 TEX13DA0A0J9YY54 714 aaPredicted RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 hCG_38984A0A1B0GV85 526 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 hCG_1809904A0A1W2PP81 198 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 A0A1W2PPE2 198 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 A0A1W2PR64 198 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 A8MXK9 166 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 C21orf140B9A014 251 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 KRBOX1C9JBD0 128 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CCSO14618 274 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 XRCC2O43543 280 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CXCL13O43927 109 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 RLN2P04090 185 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 MMP7P09237 267 aaPredicted RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 COX5BP10606 129 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 FCGR2AP12318 317 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 LYL1P12980 280 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ZNF250P15622 560 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 RPS2P15880 293 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 TCN2P20062 427 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 SERPINA2P20848 420 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CNR1P21554 472 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 DTYMKP23919 212 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ACKR3P25106 362 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 GDF1P27539 372 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 PSMB6P28072 239 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 BLVRBP30043 206 aaPredicted RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 PMELP40967 661 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 OR3A2P47893 321 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 HTR5AP47898 357 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ATP1B3P54709 279 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 SNU13P55769 128 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 CLDN15P56746 228 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 RPS18P62269 152 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 SNTB1Q13884 538 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 OR8B8Q15620 311 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ZNF674Q2M3X9 581 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 KRBOX4Q5JUW0 171 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 AADACL3Q5VUY0 350 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CST9LP1Q5W188 147 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ZNF774Q6NX45 483 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ALKAL2Q6UX46 152 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 MOB3CQ70IA8 216 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 LRRC18Q8N456 261 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 TMEM105Q8N8V8 129 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CSNK2A3Q8NEV1 391 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 Q8NFD4 153 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 PXT1Q8NFP0 134 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 OR5AP2Q8NGF4 316 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 OR5D18Q8NGL1 313 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 OR10D3Q8NH80 312 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 OR1S1Q8NH92 325 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 COQ8AQ8NI60 647 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 THAP6Q8TBB0 222 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 SUN5Q8TC36 379 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 PCNPQ8WW12 178 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 PIGTQ969N2 578 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 MRPS24Q96EL2 167 aaKnown RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 REEP6Q96HR9 211 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CXorf58Q96LI9 332 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 ALKBH3Q96Q83 286 aaPredicted RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 FAM173AQ9BQD7 235 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 RTBDNQ9BSG5 229 aaPredicted RBP4.07□□□□□ -1.76
USP48-202ENST00000374730 OR2H1Q9GZK4 316 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CTDSP1Q9GZU7 261 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 DNTTIP1Q9H147 329 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 METTL9Q9H1A3 318 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 WNT5BQ9H1J7 359 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 PPA2Q9H2U2 334 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 NARFLQ9H6Q4 476 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 RNF122Q9H9V4 155 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 CRLF2Q9HC73 371 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 GPR173Q9NS66 373 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 DEPPQ9NTK1 212 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 EHFQ9NZC4 300 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 B4GALT7Q9UBV7 327 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 TIMM10BQ9Y5J6 103 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 NCOR1O75376 2440 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms