RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 OR10P1Q8NGE3 313 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 RNF208Q9H0X6 261 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 TXNIPQ9H3M7 391 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 CLDN16Q9Y5I7 305 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 MKRN2OSH3BPM6 223 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 NDUFB4O95168 129 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 MDH2P40926 338 aaKnown RBP10.33□□□□□ -0.76
PTPN1-201ENST00000371621 SP3Q02447 781 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 PRRG4Q9BZD6 226 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 TMEM106BQ9NUM4 274 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 GDE1Q9NZC3 331 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 TRBV5-7A0A0A0MS05 114 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 SHISA8B8ZZ34 492 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 BRS3P32247 399 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 SMAGPQ0VAQ4 97 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 TIGITQ495A1 244 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 ACSM6Q6P461 480 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 DOK3Q7L591 496 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 RTN4RL2Q86UN3 420 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 SLC39A11Q8N1S5 342 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 CCL4L1Q8NHW4 92 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 ANAPC16Q96DE5 110 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 DEFB118Q96PH6 123 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 MTIF3Q9H2K0 278 aaKnown RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 DENND4AQ7Z401 1863 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 A0A1W2PNR3 127 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 IFITM10A6NMD0 228 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 CSN3P07498 182 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 APOBEC1P41238 236 aaKnown RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 PAFAH1B2P68402 229 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 KIR2DS3Q14952 304 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 HES3Q5TGS1 186 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 H1FOOQ8IZA3 346 aaPredicted RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 APOOQ9BUR5 198 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 EGLN1Q9GZT9 426 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 WFDC1Q9HC57 220 aa10.32□□□□□ -0.76
PTPN1-201ENST00000371621 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
PTPN1-201ENST00000371621 ARHGAP21Q5T5U3 1957 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 ACTL6BO94805 426 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 GALNSP34059 522 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 CLDN17P56750 224 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 ICAM4Q14773 271 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPN1-201ENST00000371621 C10orf91Q5T1B1 145 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 DDIT4LQ96D03 193 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 SCARF2Q96GP6 870 aaPredicted RBP10.31□□□□□ -0.76
PTPN1-201ENST00000371621 ZPBPQ9BS86 351 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 S1PR5Q9H228 398 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 TBC1D29Q9UFV1 150 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 A0A087WWC5 75 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 SERF1AO75920 110 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 MPLP40238 635 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 PMELP40967 661 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 SGCBQ16585 318 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 RAET1LQ5VY80 246 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 IFI44Q8TCB0 444 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 DOCK1Q14185 1865 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 RAC2P15153 192 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 GNB2P62879 340 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 CD226Q15762 336 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 CATSPERDQ86XM0 798 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 CISD2Q8N5K1 135 aaKnown RBP10.31□□□□□ -0.76
PTPN1-201ENST00000371621 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
PTPN1-201ENST00000371621 GBF1Q92538 1859 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 LOC102725191A0A1B0GVB3 256 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 E9PQ18 207 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 NXPH2O95156 264 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 CDS2O95674 445 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 UNC119Q13432 240 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 CNN3Q15417 329 aaKnown RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 TMEM230Q96A57 120 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 MESP1Q9BRJ9 268 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 RTBDNQ9BSG5 229 aaPredicted RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 POLR3KQ9Y2Y1 108 aaPredicted RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 CACNA1GO43497 2377 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 A0A1B0GU03 582 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 DPRXA6NFQ7 191 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 PSG6Q00889 435 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 SCGB2A2Q13296 93 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 RAB31Q13636 194 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 VAX1Q5SQQ9 334 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 SLC25A26Q70HW3 274 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 H1FNTQ75WM6 255 aaPredicted RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 MKXQ8IYA7 352 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 LOXL4Q96JB6 756 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 ANGPTL4Q9BY76 406 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms