RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 M0QYG6 137 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 BPNT1O95861 308 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 IFNA17P01571 189 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 ISG15P05161 165 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 SFTA3P0C7M3 94 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 ASAH2BP0C7U1 165 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 MAS1LP35410 378 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 RIDAP52758 137 aaKnown RBP12.65□□□□□ -0.38
LMO4-201ENST00000370542 RHEBQ15382 184 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 LRRC37A5PQ49AS3 106 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 TMEM128Q5BJH2 165 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 WDR38Q5JTN6 314 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 CARD17Q5XLA6 110 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 UNQ6126/PRO20091Q6UXV3 157 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 PRSS35Q8N3Z0 413 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 ULBP2Q9BZM5 246 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 HHLA2Q9UM44 414 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 GTF2A1LQ9UNN4 478 aa12.65□□□□□ -0.38
LMO4-201ENST00000370542 PRR32B1ATL7 298 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 SYNGR3O43761 229 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 CST4P01036 141 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 CHRM2P08172 466 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 B4GALT1P15291 398 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 ECI1P42126 302 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 HAAOP46952 286 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 CSNK1A1P48729 337 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 RAB2AP61019 212 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
LMO4-201ENST00000370542 NRN1LQ496H8 165 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 BTNL8Q6UX41 500 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 SLC35D2Q76EJ3 337 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 PAQR4Q8N4S7 273 aaPredicted RBP12.64□□□□□ -0.39
LMO4-201ENST00000370542 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
LMO4-201ENST00000370542 C2orf50Q96LR7 162 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 SULT4A1Q9BR01 284 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
LMO4-201ENST00000370542 CST11Q9H112 138 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 ELOVL3Q9HB03 270 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 KLHDC2Q9Y2U9 406 aa12.64□□□□□ -0.39
LMO4-201ENST00000370542 TRAV20A0A0B4J274 112 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
LMO4-201ENST00000370542 AP4M1O00189 453 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 XKRYO14609 159 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 JTBO76095 146 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 SERPINA5P05154 406 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 ERCC1P07992 297 aaPredicted RBP12.63□□□□□ -0.39
LMO4-201ENST00000370542 PGA4P0DJD7 388 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 PGA3P0DJD8 388 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 HKR1P10072 659 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 SLC2A1P11166 492 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 MUC1P15941 1255 aaPredicted RBP12.63□□□□□ -0.39
LMO4-201ENST00000370542 SRD5A1P18405 259 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 HSD11B1P28845 292 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 AQP2P41181 271 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 MAGEB1P43366 347 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 ZNF133P52736 654 aaPredicted RBP12.63□□□□□ -0.39
LMO4-201ENST00000370542 BIDP55957 195 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 PLA2G7Q13093 441 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 ZNF260Q3ZCT1 412 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 CATSPERDQ86XM0 798 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 C10orf53Q8N6V4 93 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 FGFBP3Q8TAT2 258 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 HIST1H2BAQ96A08 127 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 S100A13Q99584 98 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 MRPL13Q9BYD1 178 aaKnown RBP12.63□□□□□ -0.39
LMO4-201ENST00000370542 MS4A5Q9H3V2 200 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 ANAPC10Q9UM13 185 aa12.63□□□□□ -0.39
LMO4-201ENST00000370542 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 MEIS3P1A6NDR6 274 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 PSMD9O00233 223 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 CCSO14618 274 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 SIGLEC5O15389 551 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 OR6A2O95222 327 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 FARS2O95363 451 aaKnown RBP12.62□□□□□ -0.39
LMO4-201ENST00000370542 SFT2D2O95562 160 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 TGFAP01135 160 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 IGHV2-70P01814 119 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 CSTBP04080 98 aaKnown RBP12.62□□□□□ -0.39
LMO4-201ENST00000370542 GLAP06280 429 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
LMO4-201ENST00000370542 VAMP1P23763 118 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 IL2RGP31785 369 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 SGCAQ16586 387 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
LMO4-201ENST00000370542 LYPD6BQ8NI32 183 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms