RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 NR2C2APQ86WQ0 139 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 SIGLECL1Q8N7X8 197 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 OR13F1Q8NGS4 319 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 TAS2R3Q9NYW6 316 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 SESN1Q9Y6P5 492 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 A0A0B4J203 849 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 TMEM272A0A1B0GTI8 110 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 UBE2QL1A1L167 161 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-204ENST00000370496 SLC2A2P11168 524 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-204ENST00000370496 CDK2P24941 298 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 CHATP28329 748 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 UBE2E1P51965 193 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 C2orf76Q3KRA6 126 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 PNKDQ8N490 385 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 ZNF565Q8N9K5 539 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 OR13A1Q8NGR1 328 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 OR13D1Q8NGV5 346 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 FUNDC2Q9BWH2 189 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 LPAR5Q9H1C0 372 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
COL9A1-204ENST00000370496 A0A0A6YYD4 124 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 MEIOCA2RUB1 952 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 PAHP00439 452 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 GLAP06280 429 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 CLEC2LP0C7M8 214 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-204ENST00000370496 SAA4P35542 130 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 SIGIRRQ6IA17 410 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 ZNF497Q6ZNH5 498 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 C11orf42Q8N5U0 333 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 OR56B1Q8NGI3 324 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 DYRK2Q92630 601 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 CORO2AQ92828 525 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 FAM96BQ9Y3D0 163 aa12.12□□□□□ -0.47
COL9A1-204ENST00000370496 SOX21Q9Y651 276 aaPredicted RBP12.12□□□□□ -0.47
COL9A1-204ENST00000370496 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 CA11O75493 328 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 IL1AP01583 271 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 OMGP23515 440 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 SSTR5P35346 364 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 TGFBR1P36897 503 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 VEGFCP49767 419 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 HILS1P60008 231 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 DYNC1I2Q13409 638 aaKnown RBP12.11□□□□□ -0.47
COL9A1-204ENST00000370496 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 DEFB112Q30KQ8 113 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 OR52W1Q6IF63 320 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 HCP5Q6MZN7 132 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 HEPN1Q6WQI6 88 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 LGALS14Q8TCE9 139 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 CCDC107Q8WV48 283 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 ZNF48Q96MX3 618 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-204ENST00000370496 SULT4A1Q9BR01 284 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 TMEM133Q9H2Q1 129 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 PLEKHJ1Q9NW61 149 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 RAB22AQ9UL26 194 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
COL9A1-204ENST00000370496 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 SOCS1O15524 211 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 ARG1P05089 322 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 FBP1P09467 338 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 RAB6AP20340 208 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 NFYBP25208 207 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 EFNB2P52799 333 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 LGALS4P56470 323 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
COL9A1-204ENST00000370496 PLA2G7Q13093 441 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 BAMBIQ13145 260 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 LTC4SQ16873 150 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 MIDNQ504T8 468 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 IDNKQ5T6J7 187 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 CLEC7AQ9BXN2 247 aa12.1□□□□□ -0.47
COL9A1-204ENST00000370496 CHMP1AQ9HD42 196 aaPredicted RBP12.1□□□□□ -0.47
COL9A1-204ENST00000370496 IGHV2-26A0A0B4J1V2 119 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 METTL21EPA6NDL7 271 aa12.09□□□□□ -0.47
COL9A1-204ENST00000370496 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms