RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KIAA0141Q14154 515 aaPredicted RBP11.75□□□□□ -0.53
LDB3-202ENST00000361373 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 ZNF596Q8TC21 504 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 DPF1Q92782 380 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 CABLES2Q9BTV7 478 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 C4orf51C9J302 202 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 ADAM10O14672 748 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 OR5I1Q13606 314 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 WDR61Q9GZS3 305 aaKnown RBP11.75□□□□□ -0.53
LDB3-202ENST00000361373 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
LDB3-202ENST00000361373 P2RY1P47900 373 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 RPL31P62899 125 aaKnown RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 HLXQ14774 488 aaPredicted RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 Q9N2K0 584 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 SVILO95425 2214 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 COX6B1P14854 86 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 CSRP1P21291 193 aaKnown RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 PRDX2P32119 198 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 PRSS12P56730 875 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 H3F3AP84243 136 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 KLRB1Q12918 225 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 TNXAQ16473 311 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 CLLU1Q5K131 121 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 TEX261Q6UWH6 196 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 SLC25A42Q86VD7 318 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 U3KQ87 197 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 GCM2O75603 506 aaPredicted RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 ERVFRD-1P60508 538 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 TAGLNQ01995 201 aaKnown RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 TCTEX1D1Q8N7M0 179 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 C20orf24Q9BUV8 137 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 PKIBQ9C010 78 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
LDB3-202ENST00000361373 SLC25A10Q9UBX3 287 aaPredicted RBP11.74□□□□□ -0.53
LDB3-202ENST00000361373 MBPP02686 304 aaPredicted RBP11.73□□□□□ -0.53
LDB3-202ENST00000361373 FGF12P61328 243 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 SPP1P10451 314 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 ZPLD1Q8TCW7 415 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 LIPGQ9Y5X9 500 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 MS4A18H0YCH9 400 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
LDB3-202ENST00000361373 NDUFA6P56556 154 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 MS4A18Q3C1V0 323 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 FNDC7Q5VTL7 733 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 CDCP2Q5VXM1 449 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 GAR1Q9NY12 217 aaKnown RBP11.73□□□□□ -0.53
LDB3-202ENST00000361373 TET1Q8NFU7 2136 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 RP1P56715 2156 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 TRBV5-5A0A0J9YX44 114 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 LOC101059948A0A1B0GTJ6 334 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 A0A1B0GU03 582 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 FAM3AP98173 230 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 PRSS53Q2L4Q9 553 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 GAPTQ8N292 157 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 POM121Q96HA1 1249 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 SF3B6Q9Y3B4 125 aaKnown RBP11.73□□□□□ -0.53
LDB3-202ENST00000361373 IGHMP01871 453 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 FAM122AQ96E09 287 aa11.73□□□□□ -0.53
LDB3-202ENST00000361373 IGKV3D-11A0A0A0MRZ8 115 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ZXDCQ2QGD7 858 aaPredicted RBP11.72□□□□□ -0.53
LDB3-202ENST00000361373 ZNRF4Q8WWF5 429 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 LINC00470Q9BZP3 86 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 PRDM14Q9GZV8 571 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ELOVL5Q9NYP7 299 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 KCNE5Q9UJ90 142 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 V9GYH0 126 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 MAP1LC3B2A6NCE7 125 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
LDB3-202ENST00000361373 NANOS3P60323 173 aaKnown RBP11.72□□□□□ -0.53
LDB3-202ENST00000361373 MAP1LC3BQ9GZQ8 125 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ALX4Q9H161 411 aaPredicted RBP11.72□□□□□ -0.53
LDB3-202ENST00000361373 SYNGR1O43759 233 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 PIGYQ3MUY2 71 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 MMP26Q9NRE1 261 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 KLHDC2Q9Y2U9 406 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 PRR19A6NJB7 356 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 PAX6P26367 422 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 GUK1Q16774 197 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 OR1L8Q8NGR8 309 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 FOXJ2Q9P0K8 574 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 V9GYS6 101 aa11.72□□□□□ -0.53
LDB3-202ENST00000361373 ARID2Q68CP9 1835 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 G3V3Q6 166 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms