RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 EID2BQ96D98 161 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2W5A6NFC9 320 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2A4O95047 310 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 HLA-DQA1P01909 254 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 HKR1P10072 659 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 TM4SF4P48230 202 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 MEF2BQ02080 365 aaPredicted RBP11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 SLC35E4Q6ICL7 350 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 FBXO46Q6PJ61 603 aaPredicted RBP11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 GPA33Q99795 319 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 IL19Q9UHD0 177 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2W1Q9Y3N9 320 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 URB1O60287 2271 aaKnown RBP11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 A6NJY4 79 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 ACTL6AO96019 429 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 YBX1P67809 324 aaKnown RBP11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 CES1P1Q9UKY3 287 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 WIPI2Q9Y4P8 454 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 A0A1W2PQD3 144 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF729A6NN14 1252 aaPredicted RBP11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 KCNAB3O43448 404 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 ORM2P19652 201 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 MOB3BQ86TA1 216 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 RFESDQ8TAC1 157 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 RNF133Q8WVZ7 376 aa11.18□□□□□ -0.62
SYNCRIP-201ENST00000355238 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 A8MXK9 166 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 IL2RAP01589 272 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 CBLN3Q6UW01 205 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 GPR132Q9UNW8 380 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 KIF13AQ9H1H9 1805 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 OOEPA6NGQ2 149 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 WISP3O95389 354 aaPredicted RBP11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 GLIPR1P48060 266 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 LBX1P52954 281 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 FZD5Q13467 585 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRGPRFQ96AM1 343 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 CT62P0C5K7 136 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 CCL11P51671 97 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 SSMEM1Q8WWF3 244 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 NDUFB3O43676 98 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 KLF7O75840 302 aaPredicted RBP11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 KLK2P20151 261 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 MEOX1P50221 254 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 A0A1B0GV72 72 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 TNFRSF1AP19438 455 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 H2BFSP57053 126 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 TEPPQ6URK8 271 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 VN1R4Q7Z5H5 301 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR1B1Q8NGR6 318 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF519Q8TB69 540 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 WNT2BQ93097 391 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 PLPPR2Q96GM1 343 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 LRP5O75197 1615 aa11.17□□□□□ -0.62
SYNCRIP-201ENST00000355238 GPR3P46089 330 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 RNPS1Q15287 305 aaKnown RBP11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 PARM1Q6UWI2 310 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 SSX8Q7RTT4 187 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR13G1Q8NGZ3 307 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 H0YL77 283 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 M0R296 226 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 COMPP49747 757 aaPredicted RBP11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 GNG10P50151 68 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 ERVFRD-1P60508 538 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 A0A1W2PPC4 97 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 BMI1P35226 326 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 MFAP2P55001 183 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRGPRDQ8TDS7 321 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 TRBV5-5A0A0J9YX44 114 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 CA11O75493 328 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 CARFQ8N187 725 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 CHST5Q9GZS9 411 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 AURKAIP1Q9NWT8 199 aaPredicted RBP11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 CNTRLQ7Z7A1 2325 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 F5H697 171 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 RPL36A-HNRNPH2H7BZ11 118 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 NMUP48645 174 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 LYZP61626 148 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms