RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LYG1Q8N1E2 194 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 CYB561D1Q8N8Q1 229 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM45BQ96B21 275 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 GINS3Q9BRX5 216 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 TAS2R8Q9NYW2 309 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 MED12Q93074 2177 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 NPIPA2E9PIF3 369 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 NPIPA3F8WFD2 350 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 IFNA6P05013 189 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 SULT1A2P50226 295 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 CLDN17P56750 224 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 RIPPLY3P57055 190 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM33P57088 247 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 KCNMB1Q16558 191 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 PCK2Q16822 640 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF684Q5T5D7 378 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 FBXW9Q5XUX1 488 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 DNM1P34Q6PK57 102 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF584Q8IVC4 421 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 OR5T1Q8NG75 326 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 TBX15Q96SF7 602 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 SYT3Q9BQG1 590 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 SLC5A7Q9GZV3 580 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF281Q9Y2X9 895 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-203ENST00000354674 WISP2O76076 250 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 HPRT1P00492 218 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 NTF4P34130 210 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-203ENST00000354674 IDH3GP51553 393 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ERVS71-1P61550 626 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 FMODQ06828 376 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 SLC25A24Q6NUK1 477 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF66Q6ZN08 573 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF429Q86V71 674 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 HIST1H2AAQ96QV6 131 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 OR2J1Q9GZK6 312 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 POLR3KQ9Y2Y1 108 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-203ENST00000354674 LCATP04180 440 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 CLRN1P58418 232 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SRYQ05066 204 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 C10orf128Q5T292 105 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 EIF5AL1Q6IS14 154 aaKnown RBP8.72□□□□□ -1.01
SYNE1-203ENST00000354674 FOXL2NBQ6ZUU3 175 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 C20orf196Q8IYI0 205 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SLC26A10Q8NG04 563 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 FAM3DQ96BQ1 224 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 WDR76Q9H967 626 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 TUBD1Q9UJT1 453 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 COA3Q9Y2R0 106 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-203ENST00000354674 CEACAM6P40199 344 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 RPL22L1Q6P5R6 122 aaKnown RBP8.72□□□□□ -1.01
SYNE1-203ENST00000354674 TOMM20LQ6UXN7 152 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 C1orf87Q8N0U7 546 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SYS1Q8N2H4 156 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 OR4X1Q8NH49 305 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 MCHR2Q969V1 340 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 MRGPRFQ96AM1 343 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-203ENST00000354674 C1orf198Q9H425 327 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SPTBN4Q9H254 2564 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 APC2O95996 2303 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
SYNE1-203ENST00000354674 SDCBPO00560 298 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF205O95201 554 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 SYNGR4O95473 234 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 OMGP23515 440 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 RPL12P30050 165 aaKnown RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 GNB2P62879 340 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 PMPCAQ10713 525 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 HMGN3Q15651 99 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF324BQ6AW86 544 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 CALHM1Q8IU99 346 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 OR5AK2Q8NH90 309 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 ABHD3Q8WU67 409 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 SLC25A21Q9BQT8 299 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 PARP11Q9NR21 331 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 CKLFQ9UBR5 152 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 MCTS1Q9ULC4 181 aaKnown RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.01
SYNE1-203ENST00000354674 CEP295Q9C0D2 2601 aa8.71□□□□□ -1.01
SYNE1-203ENST00000354674 A0A1W2PPQ1 181 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 OGG1O15527 345 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 PAX1P15863 534 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 ALOX5APP20292 161 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 HNF4GQ14541 408 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF260Q3ZCT1 412 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 PHYHD1Q5SRE7 291 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 GLYATL3Q5SZD4 288 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 ANKRD16Q6P6B7 361 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 PLXDC2Q6UX71 529 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 TRAPPC6BQ86SZ2 158 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF573Q86YE8 665 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
SYNE1-203ENST00000354674 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms