RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 LRRC25Q8N386 305 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-203ENST00000349748 FAM89BQ8N5H3 189 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 OR2M3Q8NG83 312 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 LSM7Q9UK45 103 aaKnown RBP9.23□□□□□ -0.93
CAPN3-203ENST00000349748 CCL26Q9Y258 94 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 MSTNO14793 375 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 SSSCA1O60232 199 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 CLEC3AO75596 197 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 BPNT1O95861 308 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 SLC6A8P48029 635 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF154Q13106 437 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 PHLDA2Q53GA4 152 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 CENPVQ7Z7K6 275 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-203ENST00000349748 WDYHV1Q96HA8 205 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 TSPAN32Q96QS1 320 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF576Q9H609 170 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 FAM60AQ9NP50 221 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 TRANK1O15050 2925 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 MPDZO75970 2070 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 IGHV1-69-2A0A0G2JMI3 117 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 A0A1W2PPV9 198 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 IGLC7A0M8Q6 106 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 SERPINE3A8MV23 424 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM14DPA8MWL7 114 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 BGLAPP02818 100 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 AADACP22760 399 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 DUSP1P28562 367 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 MPLP40238 635 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 MTCP1P56278 107 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM187Q14656 261 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 GLIPR1L1Q6UWM5 242 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM252Q8N6L7 170 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 VN1R2Q8NFZ6 395 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 OR1N2Q8NGR9 330 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM186Q96B77 213 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 UHRF2Q96PU4 802 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF586Q9NXT0 402 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 THAP10Q9P2Z0 257 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-203ENST00000349748 BRWD1Q9NSI6 2320 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 CPMP14384 443 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 RBPJQ06330 500 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM215Q68D42 235 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 BAGE3Q86Y29 109 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 BAGE2Q86Y30 109 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 CYB5D2Q8WUJ1 264 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 DAZLQ92904 295 aaKnown RBP9.22□□□□□ -0.93
CAPN3-203ENST00000349748 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-203ENST00000349748 ADAT3Q96EY9 351 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-203ENST00000349748 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 LIME1Q9H400 295 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
CAPN3-203ENST00000349748 KBTBD11O94819 623 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 METAP1P53582 386 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 SCGB2A2Q13296 93 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 TESK1Q15569 626 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 NSDHLQ15738 373 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.21□□□□□ -0.93
CAPN3-203ENST00000349748 AMZ2Q86W34 360 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 SLC22A24Q8N4F4 322 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 ZDHHC11Q9H8X9 412 aa9.21□□□□□ -0.93
CAPN3-203ENST00000349748 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 OR7C2O60412 319 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 CTSSP25774 331 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 TAS2R46P59540 309 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF74Q16587 644 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 SLC18B1Q6NT16 456 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 ODF3L1Q8IXM7 274 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 STXBP6Q8NFX7 210 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 KCNG3Q8TAE7 436 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 LINC00615Q96LM1 132 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 RTN4RQ9BZR6 473 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 FOXQ1Q9C009 403 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 G6PC2Q9NQR9 355 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 PLSCR4Q9NRQ2 329 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 MRPS16Q9Y3D3 137 aaKnown RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 SPTBN5Q9NRC6 3674 aaKnown RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 TRAV1-1A0A0B4J248 108 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 SHISA7A6NL88 538 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF20P17024 532 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 CEBPBP17676 345 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 GABRA2P47869 451 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 OR3A4PP47883 348 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 FXYD4P59646 89 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 ARF6P62330 175 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 POLR2LP62875 67 aaKnown RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 POU3F1Q03052 451 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF468Q5VIY5 522 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 KCNIP4Q6PIL6 250 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 SIGLECL1Q8N7X8 197 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 OR4N2Q8NGD1 307 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 OR4S2Q8NH73 311 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 RTN4IP1Q8WWV3 396 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 GPX7Q96SL4 187 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-203ENST00000349748 TMEM74BQ9NUR3 256 aa9.21□□□□□ -0.94
CAPN3-203ENST00000349748 SPAG17Q6Q759 2223 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 LRRK1Q38SD2 2015 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 IGKV1D-42A0A075B6H8 117 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 IGHV2-26A0A0B4J1V2 119 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 A0A1W2PR80 420 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms