RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 GFRA3O60609 400 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 FOXC1Q12948 553 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPTN-201ENST00000345330 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 TBC1D26Q86UD7 250 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 SLC35G3Q8N808 338 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 GALNT11Q8NCW6 608 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 OR8G5Q8NG78 346 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 PARP12Q9H0J9 701 aaKnown RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 RELNP78509 3460 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 C3orf85A0A1B0GTC6 90 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 PSPNO60542 156 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 NXPH2O95156 264 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 TK1P04183 234 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 HKR1P10072 659 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 LINC00596Q86U02 117 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
NPTN-201ENST00000345330 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
NPTN-201ENST00000345330 RP1L1Q8IWN7 2480 aaPredicted RBP11.66□□□□□ -0.54
NPTN-201ENST00000345330 CADP27708 2225 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 PRSS44E7EML9 344 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 SIGLEC5O15389 551 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 DEDDO75618 318 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 EIF2S3P41091 472 aaKnown RBP11.66□□□□□ -0.54
NPTN-201ENST00000345330 ZNF83P51522 516 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 ZNF324BQ6AW86 544 aaPredicted RBP11.66□□□□□ -0.54
NPTN-201ENST00000345330 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 IFT22Q9H7X7 185 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 TMEM100Q9NV29 134 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 MEX3AA1L020 520 aaKnown RBP11.66□□□□□ -0.54
NPTN-201ENST00000345330 HLA-DRB3P79483 266 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 LRTM2Q8N967 370 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
NPTN-201ENST00000345330 SUCNR1Q9BXA5 334 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 SPACA1Q9HBV2 294 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
NPTN-201ENST00000345330 HEATR1Q9H583 2144 aaKnown RBP11.65□□□□□ -0.54
NPTN-201ENST00000345330 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 H7C1Q1 480 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
NPTN-201ENST00000345330 SNTB1Q13884 538 aaKnown RBP11.65□□□□□ -0.54
NPTN-201ENST00000345330 ZNF146Q15072 292 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 TMEM268Q5VZI3 342 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 NARFLQ9H6Q4 476 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 OR2S2Q9NQN1 319 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 TP53TG5Q9Y2B4 290 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 ZZEF1O43149 2961 aa11.65□□□□□ -0.54
NPTN-201ENST00000345330 MAP1BP46821 2468 aaKnown RBP11.65□□□□□ -0.54
NPTN-201ENST00000345330 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 K7EPK0 472 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 IFNA21P01568 189 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 IGLV2-14P01704 120 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 KIR2DS4P43632 304 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 KIR2DS1Q14954 304 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 P2RY6Q15077 328 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.55
NPTN-201ENST00000345330 ZNF497Q6ZNH5 498 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 FAM71E2Q8N5Q1 922 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 STOML3Q8TAV4 291 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 TMED6Q8WW62 240 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 ERGIC1Q969X5 290 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 SCNM1Q9BWG6 230 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 SLC25A32Q9H2D1 315 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 HES4Q9HCC6 221 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 ACACAQ13085 2346 aa11.65□□□□□ -0.55
NPTN-201ENST00000345330 KIAA2026Q5HYC2 2103 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 NKX2-6A6NCS4 301 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 TPD52L2O43399 206 aaKnown RBP11.64□□□□□ -0.55
NPTN-201ENST00000345330 KITLGP21583 273 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 NAAAQ02083 359 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 STPG2Q8N412 459 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 SYT3Q9BQG1 590 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 SMIM3Q9BZL3 60 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 TMEM222Q9H0R3 208 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 MED9Q9NWA0 146 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 ERRFI1Q9UJM3 462 aaPredicted RBP11.64□□□□□ -0.55
NPTN-201ENST00000345330 AMDHD2Q9Y303 409 aa11.64□□□□□ -0.55
NPTN-201ENST00000345330 CHD3Q12873 2000 aaKnown RBP11.64□□□□□ -0.55
NPTN-201ENST00000345330 C1QTNF9BB2RNN3 333 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms