RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OSGIN2Q9Y236 505 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 ESPL1Q14674 2120 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 A0A1W2PP11 408 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 A0A1W2PR80 420 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 CD300LBA8K4G0 201 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 PRRG2O14669 202 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 IFNA2P01563 188 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 RBMXP38159 391 aaKnown RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 CD81P60033 236 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 PRDX4Q13162 271 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 ARFRP1Q13795 201 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 BHLHA15Q7RTS1 189 aaPredicted RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 TMEM230Q96A57 120 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 KIRREL1Q96J84 757 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 SFXN3Q9BWM7 321 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 BCL2L14Q9BZR8 327 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 TUBD1Q9UJT1 453 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 BORCS7-ASMTA0A0B4J1R7 106 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 ANKRD30BLA7E2S9 258 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 K7EPK0 472 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 SOCS1O15524 211 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 IGKV3-15P01624 115 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 CELA3BP08861 270 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 CPT2P23786 658 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 NPY4RP50391 375 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 TMEM50BP56557 158 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 SRSF3P84103 164 aaKnown RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 CEACAM21Q3KPI0 293 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 ZDHHC23Q8IYP9 409 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 FAM71E2Q8N5Q1 922 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 UBAC2Q8NBM4 344 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 HIST1H2AAQ96QV6 131 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 CMSS1Q9BQ75 279 aaKnown RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 RTBDNQ9BSG5 229 aaPredicted RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 UFSP2Q9NUQ7 469 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 IL36GQ9NZH8 169 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 STRAPQ9Y3F4 350 aaKnown RBP10.98□□□□□ -0.65
CLK3-201ENST00000345005 MPC1Q9Y5U8 109 aa10.98□□□□□ -0.65
CLK3-201ENST00000345005 PIEZO2Q9H5I5 2752 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 SPRY1O43609 319 aaPredicted RBP10.97□□□□□ -0.65
CLK3-201ENST00000345005 FAM87AP0C7U9 286 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 RPL12P30050 165 aaKnown RBP10.97□□□□□ -0.65
CLK3-201ENST00000345005 RAB4BP61018 213 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 PPP1CBP62140 327 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 RAB32Q13637 225 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 SLC9A3R2Q15599 337 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 LBHQ53QV2 105 aaPredicted RBP10.97□□□□□ -0.65
CLK3-201ENST00000345005 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 UNQ6494/PRO21346Q6UXR6 183 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 GFRALQ6UXV0 394 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 FBXW12Q6X9E4 464 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 SGPP2Q8IWX5 399 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 FAM169BQ8N8A8 192 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 NAXEQ8NCW5 288 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 OR5A2Q8NGI9 324 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 TCTEX1D2Q8WW35 142 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 OR2S2Q9NQN1 319 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 NIT2Q9NQR4 276 aa10.97□□□□□ -0.65
CLK3-201ENST00000345005 SMPD2O60906 423 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 AGFG2O95081 481 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 GLAP06280 429 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 HKR1P10072 659 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 GLI4P10075 376 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 TUBG1P23258 451 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 BLVRBP30043 206 aaPredicted RBP10.96□□□□□ -0.65
CLK3-201ENST00000345005 GLP1RP43220 463 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 UCP2P55851 309 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 SUPT4H1P63272 117 aaKnown RBP10.96□□□□□ -0.65
CLK3-201ENST00000345005 CHRFAM7AQ494W8 412 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 PLAC9Q5JTB6 97 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 GPR157Q5UAW9 335 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 MYPOPQ86VE0 399 aaPredicted RBP10.96□□□□□ -0.65
CLK3-201ENST00000345005 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 OR51F2Q8NH61 342 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 ARHGAP5-AS1Q96IT6 56 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 Q96M66 194 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 PBDC1Q9BVG4 233 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 OR51B6Q9H340 312 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 TREM2Q9NZC2 230 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 OR5AC2Q9NZP5 309 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 KCNIP3Q9Y2W7 256 aa10.96□□□□□ -0.65
CLK3-201ENST00000345005 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.66
CLK3-201ENST00000345005 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.66
CLK3-201ENST00000345005 OR5H1A6NKK0 313 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 FOXI3A8MTJ6 420 aaPredicted RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 ANGPTL7O43827 346 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 TSPAN15O95858 294 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 RCC1P18754 421 aaPredicted RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 OPRM1P35372 400 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 KCNJ3P48549 501 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 S100A10P60903 97 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 RHEBQ15382 184 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 ZNF124Q15973 351 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms