RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 PRKACGP22612 351 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 SSTR5P35346 364 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 SOX6P35712 828 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 ZP1P60852 638 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 ISL1P61371 349 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 MRGPRDQ8TDS7 321 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 MNTQ99583 582 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 DEGS1O15121 323 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 PRKYO43930 277 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 MOSP00540 346 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 SERPINA3P01011 423 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 ATF1P18846 271 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 TMEM65Q6PI78 240 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 DEFB107AQ8IZN7 70 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 YIPF7Q8N8F6 280 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 PLPPR1Q8TBJ4 325 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 TBX5Q99593 518 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 ZNF580Q9UK33 172 aa12.59□□□□□ -0.39
NECTIN1-202ENST00000340882 HECTD4Q9Y4D8 3996 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 IGHV4OR15-8A0A075B7B6 117 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 A0A087WW49 117 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 LOC107986453A0A1B0GWG9 222 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 ZNF670-ZNF695F2Z2N8 137 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 SLC2A2P11168 524 aaPredicted RBP12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 KIR3DL2P43630 455 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 RAB9AP51151 201 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 ACTR3P61158 418 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 RNF166Q96A37 237 aaPredicted RBP12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 CLN6Q9NWW5 311 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 MYRFQ9Y2G1 1151 aa12.58□□□□□ -0.4
NECTIN1-202ENST00000340882 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 CD1BP29016 333 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 C21orf33P30042 268 aaPredicted RBP12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 MTNR1BP49286 362 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 MS4A2Q01362 244 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 UBALD1Q8TB05 177 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 FGGYQ96C11 551 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 OPALINQ96PE5 141 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 FAM110AQ9BQ89 295 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 ADI1Q9BV57 179 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 ZNF107Q9UII5 783 aaPredicted RBP12.57□□□□□ -0.4
NECTIN1-202ENST00000340882 LINC01619G3V211 115 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 H0YJX3 145 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 ATP6V0E1O15342 81 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 CST1P01037 141 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 PRKACBP22694 351 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 VHLP40337 213 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 FAM98BQ52LJ0 330 aaKnown RBP12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 UTS2BQ765I0 119 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 LINC00476Q8WZB0 136 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 C10orf35Q96D05 121 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 ARL8BQ9NVJ2 186 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
NECTIN1-202ENST00000340882 SLC31A2O15432 143 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 SOX15O60248 233 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 IFNA6P05013 189 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 KRT8P05787 483 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 OR8U9P0C7N5 309 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 ARSBP15848 533 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 AADACL4Q5VUY2 407 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 RITA1Q96K30 269 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 NR1H4Q96RI1 486 aaPredicted RBP12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
NECTIN1-202ENST00000340882 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 A0A1W2PQL4 384 aaPredicted RBP12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 METTL15A6NJ78 407 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 HSPA12AO43301 675 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 APOL3O95236 402 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 IGLV1-51P01701 117 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 CNTFRP26992 372 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 GK3PQ14409 553 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 SPATS1Q496A3 300 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 OR10A7Q8NGE5 316 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 OR8H1Q8NGG4 311 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 OR10AC1Q8NH08 325 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
NECTIN1-202ENST00000340882 OR4C12Q96R67 309 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms