RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PLCE1Q9P212 2302 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 H0YL77 283 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 SCTP09683 121 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 LPAR6P43657 344 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 IGFL2Q6UWQ7 119 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 CDH20Q9HBT6 801 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
RNF4-201ENST00000314289 CEACAM18A8MTB9 384 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 RNASEK-C17orf49H0YIS7 233 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 CST4P01036 141 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 FAM76BQ5HYJ3 339 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 NSUN5P2Q63ZY6 315 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 MKXQ8IYA7 352 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 IL36GQ9NZH8 169 aa10.6□□□□□ -0.71
RNF4-201ENST00000314289 COLCA2A8K830 154 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 SMPD2O60906 423 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 GRPP07492 148 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ZNF728P0DKX0 622 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 PPP1CBP62140 327 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 GABRA6Q16445 453 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 RPL7L1Q6DKI1 246 aaKnown RBP10.59□□□□□ -0.71
RNF4-201ENST00000314289 C20orf204Q6ZNR8 217 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 WDR86Q86TI4 376 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ZADH2Q8N4Q0 377 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ZNF610Q8N9Z0 462 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 AKR1E2Q96JD6 320 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 SCGB3A2Q96PL1 93 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 TECTBQ96PL2 329 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 NMES1Q9C002 83 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ZNF286AQ9HBT8 521 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 RPS10P5Q9NQ39 176 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 C9JQL5 133 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 TFF1P04155 84 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 AADACP22760 399 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 MPV17P39210 176 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 CAV2P51636 162 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 FGF12P61328 243 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 NAAAQ02083 359 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 RAB32Q13637 225 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ABCA11PQ4W5N1 156 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 RTL6Q6ICC9 239 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ASCL5Q7RTU5 278 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 PRR18Q8N4B5 295 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 DMBX1Q8NFW5 382 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 LRFN3Q9BTN0 628 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 DKK4Q9UBT3 224 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 CDIPTO14735 213 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 IFNA2P01563 188 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 OR5AC1P0C628 307 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
RNF4-201ENST00000314289 CYCSP99999 105 aaKnown RBP10.59□□□□□ -0.71
RNF4-201ENST00000314289 PPA1Q15181 289 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 EIF2S3LQ2VIR3 472 aaKnown RBP10.59□□□□□ -0.71
RNF4-201ENST00000314289 Q6ZT83 130 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 MRPL24Q96A35 216 aaKnown RBP10.59□□□□□ -0.71
RNF4-201ENST00000314289 SARAFQ96BY9 339 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 GP6Q9HCN6 339 aa10.59□□□□□ -0.71
RNF4-201ENST00000314289 TXNL1O43396 289 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 CA11O75493 328 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 ZNF44P15621 663 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 DTYMKP23919 212 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 PTAFRP25105 342 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 FABP6P51161 128 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 ACSF3Q4G176 576 aaPredicted RBP10.58□□□□□ -0.72
RNF4-201ENST00000314289 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
RNF4-201ENST00000314289 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 TAF9BQ9HBM6 251 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 TINAGQ9UJW2 476 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 NUDT19A8MXV4 375 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 AQP7O14520 342 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
RNF4-201ENST00000314289 CEBPDP49716 269 aaPredicted RBP10.58□□□□□ -0.72
RNF4-201ENST00000314289 GNG3P63215 75 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 PSG7Q13046 419 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 DHRS11Q6UWP2 260 aa10.58□□□□□ -0.72
RNF4-201ENST00000314289 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 HEXAP06865 529 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 DAOP14920 347 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 HOXC12P31275 282 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 UCP2P55851 309 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 IAH1Q2TAA2 248 aaPredicted RBP10.57□□□□□ -0.72
RNF4-201ENST00000314289 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 CLEC9AQ6UXN8 241 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 ZNF826PQ6ZT77 177 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 SEM1Q6ZVN7 128 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms