RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 A0A0A6YYJ9 748 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 CTXN2P0C2S0 81 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 NPY4RP50391 375 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 HLA-DRB3P79483 266 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 SRSF1Q07955 248 aaKnown RBP eCLIP18.83■□□□□ 0.617e-7■■□□□ 14.5
IRF3-201ENST00000309877 IGSF11Q5DX21 431 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 TMED4Q7Z7H5 227 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 ZNRF1Q8ND25 227 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 MRGPRFQ96AM1 343 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 COQ2Q96H96 371 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 SCGB3A2Q96PL1 93 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 CCL13Q99616 98 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 KIF25Q9UIL4 384 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 MAB21L2Q9Y586 359 aa18.83■□□□□ 0.61
IRF3-201ENST00000309877 PKDREJQ9NTG1 2253 aa18.83■□□□□ 0.6
IRF3-201ENST00000309877 MEIKINA0A087WXM9 373 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 TRAV39A0A0B4J263 110 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 NKX6-3A6NJ46 265 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 K7N7A8 449 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 MGST3O14880 152 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 MECP2P51608 486 aaKnown RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 EDDM3AQ14507 147 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 ATPAF1Q5TC12 328 aaPredicted RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 DHRS11Q6UWP2 260 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 LHFPL1Q86WI0 220 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 OR5D13Q8NGL4 314 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 OR4A4PQ8NGN8 299 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 MARCH1Q8TCQ1 289 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 KCNIP1Q9NZI2 227 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 VSIG4Q9Y279 399 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 C7orf66A4D0T2 115 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 BET1O15155 118 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 TK1P04183 234 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 CBX3Q13185 183 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 METTL11BQ5VVY1 283 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 C5orf24Q7Z6I8 188 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 NEU4Q8WWR8 484 aaPredicted RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 GAFA1Q96PS6 74 aa18.82■□□□□ 0.6
IRF3-201ENST00000309877 GPN1Q9HCN4 374 aaPredicted RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 MYOZ1Q9NP98 299 aaPredicted RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 MBNL3Q9NUK0 354 aaKnown RBP18.82■□□□□ 0.6
IRF3-201ENST00000309877 IL5P05113 134 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 FCGR2CP31995 323 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 ECI1P42126 302 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 GLIPR1P48060 266 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 AADACL3Q5VUY0 350 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 GLDNQ6ZMI3 551 aaPredicted RBP18.81■□□□□ 0.6
IRF3-201ENST00000309877 ZNF788Q6ZQV5 615 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 TMEM185AQ8NFB2 350 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 TMPRSS13Q9BYE2 586 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 ARFGEF3Q5TH69 2177 aa18.81■□□□□ 0.6
IRF3-201ENST00000309877 OR5H14A6NHG9 310 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 COL8A2P25067 703 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 FPR2P25090 351 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 IL13RA1P78552 427 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 PAX5Q02548 391 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 ZNF660Q6AZW8 331 aaPredicted RBP18.8■□□□□ 0.6
IRF3-201ENST00000309877 TPRX1Q8N7U7 411 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 ALX4Q9H161 411 aaPredicted RBP18.8■□□□□ 0.6
IRF3-201ENST00000309877 OR51J1Q9H342 316 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 GHITMQ9H3K2 345 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 TAF9BQ9HBM6 251 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 DLL4Q9NR61 685 aa18.8■□□□□ 0.6
IRF3-201ENST00000309877 LYNX1G3V0Z9 82 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 SIGLEC5O15389 551 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 LYNX1P0DP58 116 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 VSIG10L2P0DP72 767 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 PGAM2P15259 253 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 KCNJ8Q15842 424 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 C4orf46Q504U0 113 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 C6orf183Q5T699 404 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 SLC36A1Q7Z2H8 476 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 PRR18Q8N4B5 295 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 CHAC2Q8WUX2 184 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 MED30Q96HR3 178 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 SEC22CQ9BRL7 303 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 FAM234AQ9H0X4 552 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 DNTTIP1Q9H147 329 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 PCDHB10Q9UN67 800 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 ABCA4P78363 2273 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 HMX3A6NHT5 357 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 TMPRSS2O15393 492 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 NFYAP23511 347 aaPredicted RBP18.79■□□□□ 0.6
IRF3-201ENST00000309877 EDDM3BP56851 147 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 HERPUD1Q15011 391 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 FAM216BQ8N7L0 139 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 IL1F10Q8WWZ1 152 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 KIRREL1Q96J84 757 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 LIME1Q9H400 295 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 GPR132Q9UNW8 380 aa18.79■□□□□ 0.6
IRF3-201ENST00000309877 KMT2BQ9UMN6 2715 aaPredicted RBP18.78■□□□□ 0.6
IRF3-201ENST00000309877 IGKV1-6A0A0C4DH72 117 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 A0A1B0GW55 424 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 CEACAM18A8MTB9 384 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DIRAS3O95661 229 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DUX4L2P0CJ85 424 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DUX4L3P0CJ86 424 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DUX4L4P0CJ87 422 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DUX4L5P0CJ88 424 aa18.78■□□□□ 0.6
IRF3-201ENST00000309877 DUX4L6P0CJ89 424 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms