RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ATP23Q9Y6H3 246 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 DYSFO75923 2080 aa10.02□□□□□ -0.8
TRIM40-205ENST00000307859 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.8
TRIM40-205ENST00000307859 TRDCB7Z8K6 153 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 HAND1O96004 215 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 KNG1P01042 644 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 CD8AP01732 235 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 LMO1P25800 156 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 COL8A1P27658 744 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 FCGR2CP31995 323 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 CFHR2P36980 270 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
TRIM40-205ENST00000307859 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 MOB1BQ7L9L4 216 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 OR2Z1Q8NG97 314 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 OR10Z1Q8NGY1 313 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 CASTOR1Q8WTX7 329 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 SYT3Q9BQG1 590 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 GON7Q9BXV9 100 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 CLEC4MQ9H2X3 399 aaPredicted RBP10.02□□□□□ -0.81
TRIM40-205ENST00000307859 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 TMEM165Q9HC07 324 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 TANC2Q9HCD6 1990 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 DSCAMO60469 2012 aa10.02□□□□□ -0.81
TRIM40-205ENST00000307859 RAI1Q7Z5J4 1906 aaPredicted RBP10.01□□□□□ -0.81
TRIM40-205ENST00000307859 PLSCR5A0PG75 271 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 DPRXA6NFQ7 191 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 H7C1Q1 480 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 SIRPB1O00241 398 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 SCTP09683 121 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 CTXN2P0C2S0 81 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 RNF224P0DH78 156 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 ASCL1P50553 236 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 SEC61A1P61619 476 aaKnown RBP10.01□□□□□ -0.81
TRIM40-205ENST00000307859 HLA-DRB3P79483 266 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 FBXL19-AS1Q494R0 122 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 LIN54Q6MZP7 749 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 ZNF497Q6ZNH5 498 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 ASCC1Q8N9N2 400 aaKnown RBP10.01□□□□□ -0.81
TRIM40-205ENST00000307859 PLPPR1Q8TBJ4 325 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 MRPL24Q96A35 216 aaKnown RBP10.01□□□□□ -0.81
TRIM40-205ENST00000307859 PIK3IP1Q96FE7 263 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 ELMOD3Q96FG2 381 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 MRPL37Q9BZE1 423 aaKnown RBP10.01□□□□□ -0.81
TRIM40-205ENST00000307859 UFSP2Q9NUQ7 469 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 GLS2Q9UI32 602 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 HCFC1P51610 2035 aa10.01□□□□□ -0.81
TRIM40-205ENST00000307859 IGKV1-6A0A0C4DH72 117 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 CRYM-AS1A6NIL9 109 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 WNT9BO14905 357 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 TUSC2O75896 110 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 ZNF205O95201 554 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 PPYP01298 95 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 ZNF728P0DKX0 622 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 AADACP22760 399 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SELENOVP59797 346 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 GMFBP60983 142 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SNRPD2P62316 118 aaKnown RBP10□□□□□ -0.81
TRIM40-205ENST00000307859 SLC9A3R2Q15599 337 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SMIM21Q3B7S5 101 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 LGALSLQ3ZCW2 172 aaPredicted RBP10□□□□□ -0.81
TRIM40-205ENST00000307859 SLC38A6Q8IZM9 456 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 OR4A4PQ8NGN8 299 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 LRRC29Q8WV35 223 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 MEGF10Q96KG7 1140 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 CABLES2Q9BTV7 478 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 C1orf123Q9NWV4 160 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 RASL12Q9NYN1 266 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 TAAR3PQ9P1P4 343 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 HMSDA8MTL9 139 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SRRM5B3KS81 715 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 IFNL4K9M1U5 179 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 CCSO14618 274 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 ABCD4O14678 606 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SNAPC5O75971 98 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 CLDN1O95832 211 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 TK1P04183 234 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 NFYAP23511 347 aaPredicted RBP10□□□□□ -0.81
TRIM40-205ENST00000307859 GATA4P43694 442 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 HERV-K104P61576 105 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 BSPH1Q075Z2 132 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 KCTD9Q7L273 389 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 FAM90A1Q86YD7 464 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 COQ8AQ8NI60 647 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 TOMM40LQ969M1 308 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 OR2V2Q96R30 315 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 SEBOXQ9HB31 216 aaPredicted RBP10□□□□□ -0.81
TRIM40-205ENST00000307859 RAB18Q9NP72 206 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 MBNL3Q9NUK0 354 aaKnown RBP10□□□□□ -0.81
TRIM40-205ENST00000307859 WIPI2Q9Y4P8 454 aa10□□□□□ -0.81
TRIM40-205ENST00000307859 TRAV14DV4A0A0A6YYC5 116 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms