RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ZMAT5Q9UDW3 170 aaKnown RBP11.63□□□□□ -0.55
CTTN-201ENST00000301843 MED12LQ86YW9 2145 aa11.63□□□□□ -0.55
CTTN-201ENST00000301843 SVILO95425 2214 aa11.63□□□□□ -0.55
CTTN-201ENST00000301843 USF3Q68DE3 2245 aa11.63□□□□□ -0.55
CTTN-201ENST00000301843 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 COX6A1P12074 109 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 MMP9P14780 707 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 RPL23AP62750 156 aaKnown RBP11.62□□□□□ -0.55
CTTN-201ENST00000301843 HOXA4Q00056 320 aaPredicted RBP11.62□□□□□ -0.55
CTTN-201ENST00000301843 RHEBQ15382 184 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 OR10D3Q8NH80 312 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
CTTN-201ENST00000301843 SSX3Q99909 188 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 DUSP23Q9BVJ7 150 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 IGKV1-6A0A0C4DH72 117 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 SYNGR1O43759 233 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 LILRA1O75019 489 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 IFNA17P01571 189 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 SRP19P09132 144 aaKnown RBP11.62□□□□□ -0.55
CTTN-201ENST00000301843 ICAM4Q14773 271 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 RTL6Q6ICC9 239 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 CCDC71LQ8N9Z2 235 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 ANGPTL4Q9BY76 406 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 TMED3Q9Y3Q3 217 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 LOC102725191A0A1B0GVB3 256 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 NGFP01138 241 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 UCP2P55851 309 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 CLDN15P56746 228 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 AKR1C8PQ5T2L2 129 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 PFDN5Q99471 154 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 ZNF665Q9H7R5 613 aa11.62□□□□□ -0.55
CTTN-201ENST00000301843 STRAPQ9Y3F4 350 aaKnown RBP11.62□□□□□ -0.55
CTTN-201ENST00000301843 SLC22A20A6NK97 555 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 CNOT4O95628 575 aaKnown RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 RAB2AP61019 212 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 ELOBQ15370 118 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 ZNF100Q8IYN0 542 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 SMG1Q96Q15 3661 aaKnown RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 C5orf49A4QMS7 147 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 PINLYPA6NC86 204 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 ZNF503-AS2A6NEH8 195 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 TNRC18O15417 2968 aaPredicted RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 CA11O75493 328 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 KLF7O75840 302 aaPredicted RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 NR2C1P13056 603 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 RAC1P63000 192 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 IL22RA1Q8N6P7 574 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 PRO1933Q9H354 126 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 SCAF4O95104 1147 aaKnown RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 VAMP5O95183 116 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 TK1P04183 234 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
CTTN-201ENST00000301843 PAX6P26367 422 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 FUT6P51993 359 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 NECAP1Q8NC96 275 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 PLEKHF2Q9H8W4 249 aa11.61□□□□□ -0.55
CTTN-201ENST00000301843 RP1L1Q8IWN7 2480 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 OR6C6A6NF89 314 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 SOD3P08294 240 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 ELLP55199 621 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 ZNF266Q14584 549 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 SPATA46Q5T0L3 261 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 Q6ZRM9 215 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 GGNQ86UU5 652 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 SAP25Q8TEE9 199 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 DEPPQ9NTK1 212 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 CXorf65A6NEN9 183 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 ZNF716A6NP11 495 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 CELA3AP09093 270 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 PSG2P11465 335 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 C3AR1Q16581 482 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
CTTN-201ENST00000301843 UNQ6494/PRO21346Q6UXR6 183 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 BEND4Q6ZU67 534 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 IFI44Q8TCB0 444 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
CTTN-201ENST00000301843 SIGLEC12Q96PQ1 595 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms