RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CLEC4MQ9H2X3 399 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 PPP1R3CQ9UQK1 317 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC22A5O76082 557 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 DUS4LO95620 317 aaKnown RBP13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 CTSDP07339 412 aaPredicted RBP13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF728P0DKX0 622 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 ERP29P30040 261 aaKnown RBP13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 PRDX2P32119 198 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 COL10A1Q03692 680 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 FAM209AQ5JX71 171 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 OR5T2Q8NGG2 359 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 MITD1Q8WV92 249 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 MOB3AQ96BX8 217 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 LIME1Q9H400 295 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 RANBP3Q9H6Z4 567 aaPredicted RBP13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 PCDHB10Q9UN67 800 aa13.21□□□□□ -0.3
HERPUD1-201ENST00000300302 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 RELNP78509 3460 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 COL6A6A6NMZ7 2263 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 GOSR2O14653 212 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 BET1O15155 118 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 CLDN14O95500 239 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 PSG2P11465 335 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 PI3P19957 117 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 UCP3P55916 312 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 FXYD4P59646 89 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 EFNB3Q15768 340 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 PPP1R35Q8TAP8 253 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 ASB13Q8WXK3 278 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 TOMM40LQ969M1 308 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 MS4A5Q9H3V2 200 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 DYNLRB1Q9NP97 96 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 DLL4Q9NR61 685 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC23A1Q9UHI7 598 aa13.2□□□□□ -0.3
HERPUD1-201ENST00000300302 FAM172BPA6NC97 362 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 B9A039 149 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 PPYP01298 95 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 GZMKP49863 264 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 RAP2BP61225 183 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 CCL8P80075 99 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 LIN54Q6MZP7 749 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 LPCAT3Q6P1A2 487 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 NLRC3Q7RTR2 1065 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC38A6Q8IZM9 456 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 CASTOR1Q8WTX7 329 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 NEUROG1Q92886 237 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 HYLS1Q96M11 299 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 MBNL3Q9NUK0 354 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 CISD1Q9NZ45 108 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 OR2A4O95047 310 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF205O95201 554 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 SFT2D2O95562 160 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 AADACP22760 399 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 OR3A1P47881 315 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 ABCA11PQ4W5N1 156 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 CD177Q8N6Q3 437 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 OR10J5Q8NHC4 309 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 FXYD6Q9H0Q3 95 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 SAP30LQ9HAJ7 183 aa13.19□□□□□ -0.3
HERPUD1-201ENST00000300302 IGKV1D-17A0A075B6S4 117 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 SMLR1H3BR10 107 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 GABRA2P47869 451 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 OR2T35Q8NGX2 323 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 FAM222BQ8WU58 562 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 PIK3IP1Q96FE7 263 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 CABLES2Q9BTV7 478 aa13.18□□□□□ -0.3
HERPUD1-201ENST00000300302 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 KALRNO60229 2985 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 IGHV3OR15-7A0A075B7D8 119 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 B8ZZF3 427 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 ZG16O60844 167 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 PAX5Q02548 391 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 AESQ08117 197 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 KRBOX4Q5JUW0 171 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 LILRB1Q8NHL6 650 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 COQ8AQ8NI60 647 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 ITLN2Q8WWU7 325 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 KIRREL1Q96J84 757 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 SNX22Q96L94 193 aa13.17□□□□□ -0.3
HERPUD1-201ENST00000300302 TRBV6-7A0A0A0MS04 114 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 A0A0B4J2A0 478 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms