RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 DSPP15924 2871 aaKnown RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 RAI1Q7Z5J4 1906 aaPredicted RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 A0A0G2JMP0 313 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 H7C1Q1 480 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 F2RL2O00254 374 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 PTBP3O95758 552 aaKnown RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 UBBP0CG47 229 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 RPL23AP62750 156 aaKnown RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 CLINT1Q14677 625 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 FAM166AQ6J272 317 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ZNF573Q86YE8 665 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR4M2Q8NGB6 313 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5A2Q8NGI9 324 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR6M1Q8NGM8 313 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR8U1Q8NH10 309 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 PTX4Q96A99 478 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 DHRS9Q9BPW9 319 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ADAT1Q9BUB4 502 aaKnown RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 FBLN5Q9UBX5 448 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 CLN8Q9UBY8 286 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 MEIOCA2RUB1 952 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 CD55P08174 381 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ACAA1P09110 424 aaPredicted RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 RPS19P39019 145 aaKnown RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 MPV17P39210 176 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 HLXQ14774 488 aaPredicted RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 SFXN4Q6P4A7 337 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10J5Q8NHC4 309 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 GRPEL2Q8TAA5 225 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 GFI1Q99684 422 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 CA10Q9NS85 328 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 IL36GQ9NZH8 169 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 DYSFO75923 2080 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 TRAV8-7A0A075B6U6 113 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 PQLC2LA1A4F0 135 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 GABARAPH6UMI1 98 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ARPC1BO15143 372 aaKnown RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 PI3P19957 117 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 PSG7Q13046 419 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 MAB21L1Q13394 359 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 SMIM21Q3B7S5 101 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ATPAF1Q5TC12 328 aaPredicted RBP7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ELP2Q6IA86 826 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 CNIH2Q6PI25 160 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 TMEM65Q6PI78 240 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 THNSL2Q86YJ6 484 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 OR2T35Q8NGX2 323 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 UPRTQ96BW1 309 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 MMP27Q9H306 513 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 ZDHHC8Q9ULC8 765 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 FREM1Q5H8C1 2179 aa7.18□□□□□ -1.26
PTPDC1-201ENST00000288976 IGHV3-43A0A0B4J1X8 118 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ARPC5O15511 151 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SPRY1O43609 319 aaPredicted RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 IGHV3-43DP0DP04 118 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 CD200P41217 278 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 GAMTQ14353 236 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ASCL4Q6XD76 172 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 C17orf107Q6ZR85 190 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 OR2W3Q7Z3T1 314 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 DCUN1D4Q92564 292 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ITPKCQ96DU7 683 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 AKR1E2Q96JD6 320 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 RNF167Q9H6Y7 350 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SHISA3A0PJX4 238 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 IFITM5A6NNB3 132 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 B9A039 149 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SLC17A2O00624 439 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SIAH2O43255 324 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 LMX1BO60663 402 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SCAF4O95104 1147 aaKnown RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 PPOXP50336 477 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SRSF1Q07955 248 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SOX7Q9BT81 388 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 PKIBQ9C010 78 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SLIRPQ9GZT3 109 aaKnown RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 CISD1Q9NZ45 108 aaKnown RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 NBEAQ8NFP9 2946 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 A6NNC1 897 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 M0QYG6 137 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 RAB6AP20340 208 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 NPY4RP50391 375 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 TLE4Q04727 773 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SSX2Q16385 188 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 WDFY2Q96P53 400 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 CXXC4Q9H2H0 198 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 FN3KRPQ9HA64 309 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 PLEKHB1Q9UF11 243 aaPredicted RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 NPTNQ9Y639 398 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 KIAA2026Q5HYC2 2103 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 LRP5LA4QPB2 252 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 BOLA2-SMG1P6H3BVE0 249 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ADRA2CP18825 462 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 SERPINF1P36955 418 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms