RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 SEMA7AO75326 666 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 IL11P20809 199 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 CD200P41217 278 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 TBC1D26Q86UD7 250 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 MS4A3Q96HJ5 214 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 PRSS50Q9UI38 385 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 NQO2P16083 231 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 MMDQ15546 238 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 ATP6V1FQ16864 119 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 OR1L4Q8NGR5 311 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 ZPLD1Q8TCW7 415 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 SLC25A22Q9H936 323 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 ADRA2AP08913 450 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 AESQ08117 197 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 RSPO4Q2I0M5 234 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-201ENST00000287008 LINC00596Q86U02 117 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 ZBTB44Q8NCP5 570 aa16.16■□□□□ 0.18
PCDH1-201ENST00000287008 MGST3O14880 152 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 SYNGR2O43760 224 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 ZNF596Q8TC21 504 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 CTHRC1Q96CG8 243 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 ORM2P19652 201 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 CCL28Q9NRJ3 127 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 TXNDC12O95881 172 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 FAHD2BQ6P2I3 314 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-201ENST00000287008 OR5M8Q8NGP6 311 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 FAHD2AQ96GK7 314 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 OR2V2Q96R30 315 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 RNF115Q9Y4L5 304 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 SLC25A5P05141 298 aaKnown RBP16.15■□□□□ 0.18
PCDH1-201ENST00000287008 LYZP61626 148 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 TAGLNQ01995 201 aaKnown RBP16.15■□□□□ 0.18
PCDH1-201ENST00000287008 FABP9Q0Z7S8 132 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 TCTE3Q8IZS6 198 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 ZBTB34Q8NCN2 500 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 RPS4Y2Q8TD47 263 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 OR2W1Q9Y3N9 320 aa16.15■□□□□ 0.18
PCDH1-201ENST00000287008 TTC28Q96AY4 2481 aa16.14■□□□□ 0.18
PCDH1-201ENST00000287008 G3V3Q6 166 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 MPC2O95563 127 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 NTF3P20783 257 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 POLR2GP62487 172 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ZNF788Q6ZQV5 615 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 SHISA5Q8N114 240 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 GAPTQ8N292 157 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 TMEM105Q8N8V8 129 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 OR5R1Q8NH85 324 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ZNRF4Q8WWF5 429 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ARFGEF1Q9Y6D6 1849 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 SOX15O60248 233 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 B3GALNT1O75752 331 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ERVFRD-1P60508 538 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ST3GAL2Q16842 350 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 OR4A4PQ8NGN8 299 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 SFXN3Q9BWM7 321 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 PRNDQ9UKY0 176 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 A0A1W2PPQ1 181 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 SEC14L6B5MCN3 397 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 C4orf51C9J302 202 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 FAM162BQ5T6X4 162 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 DOK5Q9P104 306 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 IL19Q9UHD0 177 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 CCDC88CQ9P219 2028 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 PGA4P0DJD7 388 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 ERVFC1-1P60608 527 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 FHL5Q5TD97 284 aa16.14■□□□□ 0.17
PCDH1-201ENST00000287008 WDR61Q9GZS3 305 aaKnown RBP16.14■□□□□ 0.17
PCDH1-201ENST00000287008 CEACAM21Q3KPI0 293 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 ITLN1Q8WWA0 313 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 GPX7Q96SL4 187 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-201ENST00000287008 SH2D2AQ9NP31 389 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 ADAP1O75689 374 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 CCL13Q99616 98 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 NKX6-2Q9C056 277 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MAP1LC3B2A6NCE7 125 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-201ENST00000287008 FUT5Q11128 374 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 PRSS54Q6PEW0 395 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 COMMD1Q8N668 190 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MARS2Q96GW9 593 aaKnown RBP16.13■□□□□ 0.17
PCDH1-201ENST00000287008 ZNF488Q96MN9 340 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 KCNK17Q96T54 332 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MAP1LC3BQ9GZQ8 125 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MS4A18H0YCH9 400 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 RPL36A-HNRNPH2H7BZ11 118 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 SLC31A2O15432 143 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 C1QCP02747 245 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 KCNMB1Q16558 191 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 CLEC12BQ2HXU8 276 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MS4A18Q3C1V0 323 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 TEX29Q8N6K0 151 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 Q9N2K0 584 aa16.13■□□□□ 0.17
PCDH1-201ENST00000287008 MRPS18AQ9NVS2 196 aaKnown RBP16.13■□□□□ 0.17
PCDH1-201ENST00000287008 CLDN14O95500 239 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 H3F3AP84243 136 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 NAAAQ02083 359 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 SPNS3Q6ZMD2 512 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 SLC2A9Q9NRM0 540 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 ATP6V1G2-DDX39BF2Z307 99 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms