RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 APH1AQ96BI3 265 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MOB3AQ96BX8 217 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 RBMXL1Q96E39 390 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 SEH1LQ96EE3 360 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 REEP6Q96HR9 211 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ALKBH3Q96Q83 286 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 FAM234AQ9H0X4 552 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PLEKHA3Q9HB20 300 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 EXOSC3Q9NQT5 275 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 RCC2Q9P258 522 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 MTFP1Q9UDX5 166 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PURGQ9UJV8 347 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 ST3GAL6Q9Y274 331 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 KLHDC2Q9Y2U9 406 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 URGCP-MRPS24S4R325 110 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SVILO95425 2214 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MUC3AQ02505 3323 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGHV1OR15-9A0A0B4J2B8 117 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C4orf51C9J302 202 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 KLRC4-KLRK1H3BQV0 150 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PLPP3O14495 311 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DEGS1O15121 323 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 XRCC2O43543 280 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SCGB2A1O75556 95 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CLDN1O95832 211 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OXTP01178 125 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGKV1D-16P01601 117 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IFNA4P05014 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SERPINA7P05543 415 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PATE4P0C8F1 98 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LOXP28300 417 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 RPL12P30050 165 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 PRDX2P32119 198 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF133P52736 654 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 NXPH1P58417 271 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZXDAP98168 799 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FUT5Q11128 374 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLAQ13239 276 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PSG3Q16557 428 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 Q3ZCU0 254 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C6orf226Q5I0X4 101 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FAM122BQ7Z309 247 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DPPA2Q7Z7J5 298 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LYG2Q86SG7 212 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LRRTM1Q86UE6 522 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 BAP18Q8IXM2 172 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 RFLNBQ8N5W9 214 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SMRP1Q8NCR6 262 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC30A7Q8NEW0 376 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR52H1Q8NGJ2 320 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR51A2Q8NGJ7 313 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR6K3Q8NGY3 331 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZPLD1Q8TCW7 415 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GPX8Q8TED1 209 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ARHGAP5-AS1Q96IT6 56 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PRSS27Q9BQR3 290 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC39A9Q9NUM3 307 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GNG12Q9UBI6 72 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF629Q9UEG4 869 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 POLDIP2Q9Y2S7 368 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LSM2Q9Y333 95 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 FBXO7Q9Y3I1 522 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DOCK8Q8NF50 2099 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 PIKFYVEQ9Y2I7 2098 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 TRAV8-7A0A075B6U6 113 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 FOXS1O43638 330 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 TIMM8AO60220 97 aaPredicted RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 WDR1O75083 606 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 IL5P05113 134 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 ADRB1P08588 477 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 GP9P14770 177 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 SPINK2P20155 84 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 GLRA1P23415 457 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 NKX2-1P43699 371 aaPredicted RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 LIMS1P48059 325 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 CRYBA2P53672 197 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 PIGPP57054 158 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 DHRS2Q13268 280 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 RAB31Q13636 194 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 EDDM3AQ14507 147 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 KISS1Q15726 138 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 CEACAM16Q2WEN9 425 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 PAN3Q58A45 887 aaKnown RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 MESTQ5EB52 335 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 OR8G2PQ6IF36 304 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 TSEN54Q7Z6J9 526 aaKnown RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 ATG4DQ86TL0 474 aaPredicted RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 DTX1Q86Y01 620 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 KMT5CQ86Y97 462 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 TMEM229BQ8NBD8 167 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 DMBX1Q8NFW5 382 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 OR2AE1Q8NHA4 323 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 OR10J5Q8NHC4 309 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 RTN4IP1Q8WWV3 396 aaPredicted RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 KIRREL1Q96J84 757 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 SPATA25Q9BR10 227 aa2.48□□□□□ -2.01
HERC4-201ENST00000277817 NKX6-2Q9C056 277 aaPredicted RBP2.48□□□□□ -2.01
HERC4-201ENST00000277817 PPP1R3EQ9H7J1 279 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms