RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
UBXN4-201ENST00000272638 SEMA5BQ9P283 1151 aa10.82□□□□□ -0.68
UBXN4-201ENST00000272638 LOC102723996A0A087X1L8 192 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 TAAR5O14804 337 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 CD8AP01732 235 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF83P51522 516 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF266Q14584 549 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 RBMXL1Q96E39 390 aaKnown RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 OSGIN2Q9Y236 505 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 HOXD4P09016 255 aaPredicted RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 RD3LP0DJH9 198 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 MRGPRFQ96AM1 343 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 RFNGQ9Y644 331 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 MUC6Q6W4X9 2439 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF716A6NP11 495 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 NAT1P18440 290 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 SELENOVP59797 346 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 H3F3AP84243 136 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF345Q14585 488 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF273Q14593 569 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 PRAMEF6Q5VXH4 476 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 BIN3Q9NQY0 253 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 M0R1B8 84 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 PPP1CBP62140 327 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 QRFPP83859 136 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 SRSF6Q13247 344 aaKnown RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 AVPI1Q5T686 147 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 OR2Z1Q8NG97 314 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 SLC25A40Q8TBP6 338 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 BSCL2Q96G97 398 aaPredicted RBP10.81□□□□□ -0.68
UBXN4-201ENST00000272638 PLEKHF2Q9H8W4 249 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 MMP26Q9NRE1 261 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 C19orf12Q9NSK7 152 aa10.81□□□□□ -0.68
UBXN4-201ENST00000272638 SPRY3O43610 288 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 CELA3BP08861 270 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 FGF2P09038 288 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 HKR1P10072 659 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 PHYHIPLQ96FC7 376 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 COL6A3P12111 3177 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 OR6C65A6NJZ3 312 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 NTN3O00634 580 aaPredicted RBP10.8□□□□□ -0.68
UBXN4-201ENST00000272638 SH2D1BO14796 132 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 TAGLN2P37802 199 aaKnown RBP10.8□□□□□ -0.68
UBXN4-201ENST00000272638 GGNQ86UU5 652 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 DTX1Q86Y01 620 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 FAM24BQ8N5W8 94 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 HS3ST6Q96QI5 342 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 PROK2Q9HC23 129 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 TMEM265A0A087WTH1 108 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 TRIM77I1YAP6 450 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 GPR137BO60478 399 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 IL2RAP01589 272 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 SP9P0CG40 484 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 PSG2P11465 335 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 DYNLT3P51808 116 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 SRPXP78539 464 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 HOXA4Q00056 320 aaPredicted RBP10.8□□□□□ -0.68
UBXN4-201ENST00000272638 BAXQ07812 192 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 V9GYS6 101 aa10.8□□□□□ -0.68
UBXN4-201ENST00000272638 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 hCG_38984A0A1B0GV85 526 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 NAT2P11245 290 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 RHEBQ15382 184 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 CYTIPO60759 359 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 IFNA10P01566 189 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 AESQ08117 197 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 POC1AQ8NBT0 407 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 RSRP1Q9BUV0 290 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 ZNF703Q9H7S9 590 aaPredicted RBP10.79□□□□□ -0.68
UBXN4-201ENST00000272638 SMCO4Q9NRQ5 59 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 GFOD1Q9NXC2 390 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 PSENENQ9NZ42 101 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 OR1A1Q9P1Q5 309 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 TMED3Q9Y3Q3 217 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 USF3Q68DE3 2245 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 NEURL1O76050 574 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 IFNA4P05014 189 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 RNPS1Q15287 305 aaKnown RBP10.79□□□□□ -0.68
UBXN4-201ENST00000272638 RSPO1Q2MKA7 263 aaPredicted RBP10.79□□□□□ -0.68
UBXN4-201ENST00000272638 NECAP1Q8NC96 275 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 MUCL1Q96DR8 90 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 POLDIP2Q9Y2S7 368 aa10.79□□□□□ -0.68
UBXN4-201ENST00000272638 SPG11Q96JI7 2443 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 PROB1E7EW31 1015 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 LILRA1O75019 489 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 HEXAP06865 529 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 CSRP1P21291 193 aaKnown RBP10.78□□□□□ -0.68
UBXN4-201ENST00000272638 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBXN4-201ENST00000272638 FOXD3Q9UJU5 478 aaPredicted RBP10.78□□□□□ -0.68
UBXN4-201ENST00000272638 OTOGLQ3ZCN5 2332 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 DTYMKP23919 212 aa10.78□□□□□ -0.68
UBXN4-201ENST00000272638 S100A2P29034 98 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms