RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 RAB27BO00194 218 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 PRTN3P24158 256 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 DLX6P56179 175 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 DYNC1I2Q13409 638 aaKnown RBP13.53□□□□□ -0.24
SNRPF-201ENST00000266735 ZNF497Q6ZNH5 498 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 IL17RELQ6ZVW7 336 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 GAPTQ8N292 157 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 OR10R2Q8NGX6 335 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 ACOT12Q8WYK0 555 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 AP3S1Q92572 193 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 SULT4A1Q9BR01 284 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 ATG5Q9H1Y0 275 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 RHBDL2Q9NX52 303 aa13.53□□□□□ -0.24
SNRPF-201ENST00000266735 TRAV40A0A0B4J280 105 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 MEX3AA1L020 520 aaKnown RBP13.52□□□□□ -0.25
SNRPF-201ENST00000266735 UBE2QL1A1L167 161 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 CCDC160A6NGH7 325 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 H3BMQ9 156 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 FSHBP01225 129 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 MT-ND4P03905 459 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 GLP1RP43220 463 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 TMEM50BP56557 158 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 ERVFRD-1P60508 538 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 SPCS2Q15005 226 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 OR5H6Q8NGV6 325 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 RAB3CQ96E17 227 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 ARHGAP5-AS1Q96IT6 56 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 FAAP24Q9BTP7 215 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 PECRQ9BY49 303 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 SIRT7Q9NRC8 400 aa13.52□□□□□ -0.25
SNRPF-201ENST00000266735 ABCA1O95477 2261 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 ZNF729A6NN14 1252 aaPredicted RBP13.51□□□□□ -0.25
SNRPF-201ENST00000266735 ZNF182P17025 639 aaPredicted RBP13.51□□□□□ -0.25
SNRPF-201ENST00000266735 SRD5A1P18405 259 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 SOX6P35712 828 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 MOGAT2Q3SYC2 334 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 KLF17Q5JT82 389 aaPredicted RBP13.51□□□□□ -0.25
SNRPF-201ENST00000266735 PLAC9Q5JTB6 97 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 GPR157Q5UAW9 335 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 MRGPRDQ8TDS7 321 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 DYRK2Q92630 601 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
SNRPF-201ENST00000266735 RIMS4Q9H426 269 aaPredicted RBP13.51□□□□□ -0.25
SNRPF-201ENST00000266735 NUP50Q9UKX7 468 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 TRAPPC2LQ9UL33 140 aa13.51□□□□□ -0.25
SNRPF-201ENST00000266735 YLPM1P49750 1951 aaKnown RBP13.5□□□□□ -0.25
SNRPF-201ENST00000266735 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 KBTBD11-OT1A0A1B0GTJ5 212 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
SNRPF-201ENST00000266735 CLPXO76031 633 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 IGHV1-8P0DP01 117 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
SNRPF-201ENST00000266735 GZMHP20718 246 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 BPIFB3P59826 476 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 GUCA2AQ02747 115 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 SCGB2A2Q13296 93 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 TNFRSF14Q92956 283 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 LHX4Q969G2 390 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
SNRPF-201ENST00000266735 RSL24D1Q9UHA3 163 aaKnown RBP13.5□□□□□ -0.25
SNRPF-201ENST00000266735 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CENPVL3A0A0U1RRI6 287 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 SMIM31A0A1B0GVY4 71 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 A6NJ64 397 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 SERPINE3A8MV23 424 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 MFNGO00587 321 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 FAM157CP0CG43 387 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CGB3P0DN86 165 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CGB7P0DN87 165 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 IGHV4-38-2P0DP08 117 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 HOXB4P17483 251 aaPredicted RBP13.49□□□□□ -0.25
SNRPF-201ENST00000266735 C17orf58Q2M2W7 97 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 UBE2NLQ5JXB2 153 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 MZT2AQ6P582 158 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 HEPN1Q6WQI6 88 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 RTN4RL2Q86UN3 420 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 MRPL30Q8TCC3 161 aaKnown RBP13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CCDC107Q8WV48 283 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CYYR1Q96J86 154 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 KRTAP3-3Q9BYR6 98 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 KRTAP3-2Q9BYR7 98 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 ABCG5Q9H222 651 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 HEXA-AS1Q9H8Q6 139 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 LINC00574Q9H8X3 128 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 RAB9BQ9NP90 201 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 C12orf4Q9NQ89 552 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 MBNL3Q9NUK0 354 aaKnown RBP13.49□□□□□ -0.25
SNRPF-201ENST00000266735 AK3Q9UIJ7 227 aa13.49□□□□□ -0.25
SNRPF-201ENST00000266735 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.254e-17■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms