RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZNF665Q9H7R5 613 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 TUBA4BQ9H853 241 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 TINAGQ9UJW2 476 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 KCNS2Q9ULS6 477 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 C5orf49A4QMS7 147 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 C9J4A7 227 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 METTL15P1P0C7V9 234 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 EDN3P14138 238 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 MMP9P14780 707 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 RAC1P63000 192 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 STX12Q86Y82 276 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 OR10D3Q8NH80 312 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 UNKLQ9H9P5 680 aaKnown RBP10.66□□□□□ -0.7
CHMP3-201ENST00000263856 DECR2Q9NUI1 292 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 PITX3O75364 302 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 IFNA5P01569 189 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 SERPINE2P07093 398 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 ICAM4Q14773 271 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 ELOBQ15370 118 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF880Q6PDB4 577 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 WDR5BQ86VZ2 330 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 PLK3Q9H4B4 646 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 LYRM2Q9NU23 88 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-201ENST00000263856 hCG_38984A0A1B0GV85 526 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF732B4DXR9 585 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 DEFA6Q01524 100 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 HIKESHIQ53FT3 197 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.7
CHMP3-201ENST00000263856 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 CALHM2Q9HA72 323 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
CHMP3-201ENST00000263856 MRPS17Q9Y2R5 130 aaKnown RBP10.65□□□□□ -0.7
CHMP3-201ENST00000263856 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 CXorf65A6NEN9 183 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 SLC22A20A6NK97 555 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 PPIHO43447 177 aaKnown RBP10.65□□□□□ -0.71
CHMP3-201ENST00000263856 CDS2O95674 445 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 IGHV2-70P01814 119 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 TLE4Q04727 773 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 PRDX4Q13162 271 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF385CQ66K41 422 aaPredicted RBP10.65□□□□□ -0.71
CHMP3-201ENST00000263856 LILRB2Q8N423 598 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 LRTM2Q8N967 370 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 SCGB1C1Q8TD33 95 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 RNF138Q8WVD3 245 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 SNX22Q96L94 193 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 PROK2Q9HC23 129 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 KIAA1456Q9P272 454 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 SEMA5BQ9P283 1151 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 DOCK10Q96BY6 2186 aa10.65□□□□□ -0.71
CHMP3-201ENST00000263856 A0A087WZY1 265 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 A0A0G2JRQ6 117 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 CEBPZOSA8MTT3 80 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 UMODP07911 640 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 PSG2P11465 335 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 CD200P41217 278 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 CPEB3Q8NE35 698 aaKnown RBP10.64□□□□□ -0.71
CHMP3-201ENST00000263856 TRAPPC2LH3BP13 241 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 SYNGR1O43759 233 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BKO60814 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 CBR3O75828 277 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BJP06899 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 CST2P09228 141 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BOP23527 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BBP33778 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BDP58876 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 RAC3P60763 192 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BCP62807 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H3AP68431 136 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST2H2BEQ16778 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST2H3PS2Q5TEC6 136 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
CHMP3-201ENST00000263856 ERRFI1Q9UJM3 462 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-201ENST00000263856 OR6C6A6NF89 314 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 IFITM10A6NMD0 228 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 RPL36A-HNRNPH2H7BZ11 118 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 COX6A1P12074 109 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 HOXA5P20719 270 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 FKBP2P26885 142 aaKnown RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 EPHA8P29322 1005 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 SRPXP78539 464 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 HERPUD1Q15011 391 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 SPATA46Q5T0L3 261 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 TMEM211Q6ICI0 200 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 OR8G2PQ6IF36 304 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 IFI44Q8TCB0 444 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 PHF7Q9BWX1 381 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 ZDBF2Q9HCK1 2354 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 SOD3P08294 240 aa10.63□□□□□ -0.71
CHMP3-201ENST00000263856 CDX1P47902 265 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-201ENST00000263856 FOXG1P55316 489 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms