RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CFHR5Q9BXR6 569 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-201ENST00000261037 URB1O60287 2271 aaKnown RBP10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TRAV20A0A0B4J274 112 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 NKX2-6A6NCS4 301 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-201ENST00000261037 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 SLC26A10Q8NG04 563 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 ZNF721Q8TF20 911 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 RGS13O14921 159 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 C1QAP02745 245 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 SNRPCP09234 159 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 BRS3P32247 399 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 EFNB2P52799 333 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 ZNF385AQ96PM9 386 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM140Q9NV12 185 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 KLHDC2Q9Y2U9 406 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 KCNMB2Q9Y691 235 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 TCRBV16S1A1N1A0A5B0 115 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 LSM6P62312 80 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 C10orf113Q5VZT2 155 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 DHRS11Q6UWP2 260 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 NAT8Q9UHE5 227 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 RABAC1Q9UI14 185 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 PPYP01298 95 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 IGKV1D-16P01601 117 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 PRSS1P07477 247 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 FAM87AP0C7U9 286 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 SCAND1P57086 179 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 RPL30P62888 115 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 SCMH1Q96GD3 660 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 HARBI1Q96MB7 349 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 RGPD4Q7Z3J3 1758 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 GON4LQ3T8J9 2241 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 KIAA1217Q5T5P2 1943 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 CXCL3P19876 107 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 ACAA2P42765 397 aaKnown RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 NAAAQ02083 359 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 ADAT3Q96EY9 351 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-201ENST00000261037 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 CCKARP32238 428 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 AWAT1Q58HT5 328 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 DCAF10Q5QP82 559 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 RFLNBQ8N5W9 214 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 TPRX1Q8N7U7 411 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 LPAR5Q9H1C0 372 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 MIXL1Q9H2W2 232 aa10.59□□□□□ -0.71
COL8A1-201ENST00000261037 SMCHD1A6NHR9 2005 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 C21orf140B9A014 251 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 OR1L1Q8NH94 360 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 CLN8Q9UBY8 286 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 SRSF10O75494 262 aaKnown RBP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 LY86O95711 162 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 C19orf57Q0VDD7 668 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM183BQ1AE95 376 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 ADAMTS17Q8TE56 1095 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 FAM222BQ8WU58 562 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 ASB5Q8WWX0 329 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 VSIG4Q9Y279 399 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 P01737 135 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 C21orf58P58505 322 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 SIGLEC14Q08ET2 396 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF441Q8N8Z8 693 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 GSX1Q9H4S2 264 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 AUP1Q9Y679 476 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 DUXBA0A1W2PPF3 345 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 TTRP02766 147 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 PSMB2P49721 201 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 EWSR1Q01844 656 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 CEBPEQ15744 281 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF880Q6PDB4 577 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 OR11H7Q8NGC8 314 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 VSTM2AQ8TAG5 236 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 DYNLRB2Q8TF09 96 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 MARVELD1Q9BSK0 173 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 SLC2A9Q9NRM0 540 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM167BQ9NRX6 74 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 SLC25A10Q9UBX3 287 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 ZMAT5Q9UDW3 170 aaKnown RBP10.58□□□□□ -0.72
COL8A1-201ENST00000261037 NEU3Q9UQ49 428 aa10.58□□□□□ -0.72
COL8A1-201ENST00000261037 OR2T8A6NH00 312 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 FAM157CP0CG43 387 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 CD1BP29016 333 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM50BP56557 158 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms