RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 DNASE2O00115 360 aaPredicted RBP6.71□□□□□ -1.33
CXCR4-201ENST00000241393 DEDDO75618 318 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 HOXB5P09067 269 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF728P0DKX0 622 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 B4GALT1P15291 398 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF708P17019 499 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 CTRB1P17538 263 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 IGFBP2P18065 325 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 TCN2P20062 427 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 GLP1RP43220 463 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 PJVKQ0ZLH3 352 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 TAF9Q16594 264 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 CTRB2Q6GPI1 263 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 KRTAP1-3Q8IUG1 177 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 FAM185AQ8N0U4 392 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 SPAG16Q8N0X2 631 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 AKR7LQ8NHP1 331 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 TMED6Q8WW62 240 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 MAFIPQ8WZ33 124 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 ROBO4Q8WZ75 1007 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 PSMF1Q92530 271 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 GUCD1Q96NT3 240 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 FAM173AQ9BQD7 235 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 SULT4A1Q9BR01 284 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 FAAP24Q9BTP7 215 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 SPRY4Q9C004 299 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 P4HTMQ9NXG6 502 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 B4GALT7Q9UBV7 327 aa6.71□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF629Q9UEG4 869 aaPredicted RBP6.71□□□□□ -1.33
CXCR4-201ENST00000241393 EYSQ5T1H1 3165 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 IGKV1-12A0A0C4DH73 117 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF850A8MQ14 1090 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 E5RGE8 158 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 K7EPK0 472 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 TOR1AO14656 332 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 ANGPTL7O43827 346 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 TRAPPC6AO75865 159 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 IGKV1D-12P01611 117 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 MBPP02686 304 aaPredicted RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 SFTPBP07988 381 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 RFPL3SP0C7P2 107 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 FUT3P21217 361 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 GDF1P27539 372 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 SULT1A2P50226 295 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 CLDN15P56746 228 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 RBM11P57052 281 aaKnown RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 PIGPP57054 158 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 S100A10P60903 97 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 SRPXP78539 464 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 DEFA5Q01523 94 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF92Q03936 586 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM187Q14656 261 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 PABPC1L2AQ5JQF8 200 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 GPR157Q5UAW9 335 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM268Q5VZI3 342 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 GGNBP1Q5YKI7 109 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 SKA3Q8IX90 412 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 LGI3Q8N145 548 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 FBXL14Q8N1E6 418 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 FAM71E2Q8N5Q1 922 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 CCDC71LQ8N9Z2 235 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 OR10AD1Q8NGE0 317 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 OR51F2Q8NH61 342 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 MOB3AQ96BX8 217 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 NARS2Q96I59 477 aaKnown RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 TSNAXQ99598 290 aaKnown RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 ABHD14AQ9BUJ0 271 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 OPA3Q9H6K4 179 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 DEPPQ9NTK1 212 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 ABI3Q9P2A4 366 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 PURGQ9UJV8 347 aaKnown RBP6.71□□□□□ -1.34
CXCR4-201ENST00000241393 NSG2Q9Y328 171 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 DMRT1Q9Y5R6 373 aa6.71□□□□□ -1.34
CXCR4-201ENST00000241393 COL27A1Q8IZC6 1860 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 MYO7BQ6PIF6 2116 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF724A8MTY0 619 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 C21orf140B9A014 251 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 MGST3O14880 152 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 GEMIN2O14893 280 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 MRPL33O75394 65 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ACTL6AO96019 429 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 RPL12P30050 165 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 CAV2P51636 162 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 FAM3BP58499 235 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 RPS18P62269 152 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 SIGLEC14Q08ET2 396 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 IL13RA2Q14627 380 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ABCA11PQ4W5N1 156 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 DMRTC1Q5HYR2 192 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 PLCXD3Q63HM9 321 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 TIPARPQ7Z3E1 657 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 DPPA2Q7Z7J5 298 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 COMMD1Q8N668 190 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 UBAC2Q8NBM4 344 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms