RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ARFGEF1Q9Y6D6 1849 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 J3KRW8 73 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 ZNF253O75346 499 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 MPLP40238 635 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 FOXO1Q12778 655 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 OR10A7Q8NGE5 316 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 LHX9Q9NQ69 397 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 TINAGQ9UJW2 476 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 MIOXQ9UGB7 285 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 CACNA1CQ13936 2221 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 ACAA2P42765 397 aaKnown RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 TGIF2LYQ8IUE0 185 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 PCED1AQ9H1Q7 454 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 BET1LQ9NYM9 111 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 NPTNQ9Y639 398 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 MIA3Q5JRA6 1907 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 TFF2Q03403 129 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 BHLHA15Q7RTS1 189 aaPredicted RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 M0R143 59 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 CCL4P13236 92 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 ZFP36L2P47974 494 aaKnown RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 MOGAT3Q86VF5 341 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 CA5BP1Q8WTZ4 195 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 TECRQ9NZ01 308 aaKnown RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 ZFC3H1O60293 1989 aaKnown RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 MFNGO00587 321 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 MEGF10Q96KG7 1140 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 ACAA1P09110 424 aaPredicted RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 ELF5Q9UKW6 265 aaPredicted RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 TMEM265A0A087WTH1 108 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 PTP4A3O75365 173 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 PRSS53Q2L4Q9 553 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 HES3Q5TGS1 186 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 TIPARPQ7Z3E1 657 aaKnown RBP11.72□□□□□ -0.53
NEK4-201ENST00000233027 RNF133Q8WVZ7 376 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 ZNF488Q96MN9 340 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
NEK4-201ENST00000233027 FAM87AP0C7U9 286 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 VDAC1P21796 283 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 IER3P46695 156 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 PPOXP50336 477 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 PRRX1P54821 245 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 B2MP61769 119 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 WFDC6Q9BQY6 131 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 GPR35Q9HC97 309 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 FAM157CP0CG43 387 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 OR10C1Q96KK4 312 aa11.71□□□□□ -0.53
NEK4-201ENST00000233027 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.54
NEK4-201ENST00000233027 TNFSF14O43557 240 aa11.71□□□□□ -0.54
NEK4-201ENST00000233027 ATP6V0CP27449 155 aa11.71□□□□□ -0.54
NEK4-201ENST00000233027 TCTAP57738 103 aa11.71□□□□□ -0.54
NEK4-201ENST00000233027 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.54
NEK4-201ENST00000233027 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 OR2M3Q8NG83 312 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 DPF1Q92782 380 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 PRSS27Q9BQR3 290 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 COL4A1P02462 1669 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 RPL36A-HNRNPH2H7BZ11 118 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 WNT5AP41221 380 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 AESQ08117 197 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 ELOBQ15370 118 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 SLC35E3Q7Z769 313 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 D2HGDHQ8N465 521 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 WNT2BQ93097 391 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 TMEM255AQ5JRV8 349 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 ZNF721Q8TF20 911 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 NUP214P35658 2090 aaPredicted RBP11.7□□□□□ -0.54
NEK4-201ENST00000233027 PRSS1P07477 247 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
NEK4-201ENST00000233027 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
NEK4-201ENST00000233027 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
NEK4-201ENST00000233027 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 MCM3APO60318 1980 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 SMIM6P0DI80 62 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 ZNF788Q6ZQV5 615 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 OR5AU1Q8NGC0 362 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 C10orf35Q96D05 121 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
NEK4-201ENST00000233027 ZNF71Q9NQZ8 489 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms