RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm21258A0A087WQC7 222 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm28102A0A087WQL3 222 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm21095A0A087WR14 222 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm20824A0A087WS97 222 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm29866A0A0A6YX04 222 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm14409A2ARR8 349 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm438B1ASB3 393 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rdh16f1E9Q9P8 317 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 B3galt1O54904 326 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 GrprP21729 384 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fkbp2P45878 140 aaKnown RBP11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tmem71Q149F5 287 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 N4bp2l1Q3V2Q8 238 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 NarflQ7TMW6 476 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Srrm4Q8BKA3 608 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ly6g6eQ8K1T6 166 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rdh9Q8K5C8 317 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr1450Q8VF19 325 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr279Q8VFD8 310 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr830Q8VFJ5 315 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr1301Q8VGE7 312 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Q8WUR0 141 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fbxo36Q9CQ24 188 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Teddm3Q9CQH1 294 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Pop4Q9CR08 221 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ssna1Q9JJ94 119 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cpn1Q9JJN5 457 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ccr9Q9WUT7 369 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ralgapa1Q6GYP7 2035 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 RttnQ8R4Y8 2226 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cfap54Q8C6S9 3106 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 CenpfE9Q3P4 2997 aaKnown RBP11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm5901D3YVJ1 333 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr747E9PXH6 313 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr749E9Q438 313 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm42421F6X8D5 166 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm20403G3UYB0 123 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cbfa2t3O54972 620 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tgfbr3O88393 850 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Saa2P05367 122 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Itgb2P11835 771 aaKnown RBP11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gabrr1P56475 480 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 H2-T22Q31615 379 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm12258Q5NC63 627 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Phox2aQ62066 280 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Wbp1lQ8BGW2 348 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 RhbgQ8BUX5 455 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tssk5Q8C1R0 372 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fam169bQ8CHT6 337 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Commd1Q8K4M5 188 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Nfam1Q8R4V1 264 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Hsd17b13Q8VCR2 304 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Alg12Q8VDB2 486 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr1389Q8VGX0 311 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rbm39Q8VH51 530 aaKnown RBP11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 9230110F15RikQ9D262 117 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 2900055J20RikQ9D6G3 140 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 P2ry4Q9JJS7 361 aa11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 RbmxQ9WV02 391 aaKnown RBP11.34□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm10260F6YVP7 152 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tlx3O55144 291 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hprt1P00493 218 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 HbzP06467 142 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 CtsbP10605 339 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 DaoP18894 345 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Atf1P81269 269 aaKnown RBP11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 VwceQ3U515 929 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hs3st6Q5GFD5 342 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Plekhm1Q7TSI1 1074 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fbxo46Q8BG80 603 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Coro2aQ8C0P5 524 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Pomt1Q8R2R1 746 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Calhm2Q8VEC4 323 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Dnajc24Q91ZF0 196 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Samd8Q9DA37 478 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Dtd1Q9DD18 209 aaKnown RBP11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr957Q9EQB7 311 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 St6galnac5Q9QYJ1 336 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 ChrdQ9Z0E2 948 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fer1l4A3KGK3 1992 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr455A0A0B4J1M2 317 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr721-ps1A0A140T8T9 324 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm13547A2ARC0 163 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp160E9Q459 650 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm8024L7N2E0 100 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hoxb1P17919 297 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hist1h1dP43277 221 aaKnown RBP11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Nkain2Q4PNJ2 208 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Elavl2Q60899 360 aaKnown RBP11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 DbpQ60925 325 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Kyat3Q71RI9 455 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1131Q7TR45 309 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 TecrlQ8BFZ1 361 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Smim37Q8BT35 56 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Depp1Q8K2F3 205 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Alkbh4Q9D8F1 300 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Aurkaip1Q9DCJ7 200 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Wwtr1Q9EPK5 395 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fbxw4Q9JMJ2 410 aa11.33□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm45716A0A1B0GRQ0 93 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms