RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Med6Q921D4 246 aaKnown RBP10.52□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ms4a4bQ9ES61 226 aa10.52□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Stard10Q9JMD3 291 aa10.52□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Kif26aQ52KG5 1881 aa10.52□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Pfdn2O70591 154 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gpr12P35412 334 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Srp9P49962 86 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ube2mP61082 183 aaKnown RBP10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 LiphQ8CIV3 451 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Pttg1ipQ8R143 174 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr720Q8VF37 316 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Dtd1Q9DD18 209 aaKnown RBP10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Igkv1-135A0A0B4J1H7 120 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Btbd35f21A0A140T8Q5 498 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1150-ps1A0A1L1STL1 316 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Psg20E9Q9B4 475 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 H2-DMaP28078 261 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Upk2P38575 184 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fkbp14P59024 211 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lsm6P62313 80 aaKnown RBP10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ascl1Q02067 231 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Sav1Q8VEB2 386 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Snx18Q91ZR2 614 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Stoml2Q99JB2 353 aaKnown RBP10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cthrc1Q9D1D6 245 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 FcrlsQ9EQY5 509 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 TpbgQ9Z0L0 426 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fndc7A2AED3 737 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 CatsperdE9Q9F6 805 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 NrtnP97463 195 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Msl2Q69ZF8 577 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gal3st2Q6XQH0 394 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1106Q7TR57 312 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gucd1Q8BZI6 239 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 FkrpQ8CG64 494 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 HinfpQ8K1K9 503 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cuedc1Q8R3V6 388 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lhfpl3Q9CTN8 222 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 CmipQ9D486 773 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Jag2Q9QYE5 1247 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Slc35a2Q9R0M8 390 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Igkv6-25A0A140T8N7 115 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr568E9Q554 313 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 P2rx6O54803 389 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fgf2P15655 154 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1225Q7TR01 311 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 B430218F22RikQ8BQR5 223 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr860Q8VFF7 317 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Golt1aQ9DCQ3 133 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Hoga1Q9DCU9 321 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Nrg4Q9WTX4 115 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cldn13Q9Z0S4 211 aa10.51□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fcgr4A0A0B4J1G0 249 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Slc18a3O35304 530 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 MscO88940 201 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm10277Q6R5C6 214 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Znf385aQ8VD12 386 aaKnown RBP10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Il24Q925S4 181 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lims1Q99JW4 325 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ms4a4dQ99N05 225 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Utp23Q9CX11 249 aaKnown RBP10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trem1Q9JKE2 230 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 2410004P03RikA0A087WQY2 205 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr789A0A1L1SV77 312 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ube2dnl1A2AFH1 155 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr419E9Q0Y7 313 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fgf11P70378 225 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r15Q14C10 299 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tcfl5Q32NY8 489 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 DdiasQ6NZG4 898 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Yipf6Q8BR70 236 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tox4Q8BU11 619 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr214Q8VG27 320 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ankrd10Q99LW0 415 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mcm3apQ9WUU9 1971 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 2010315B03RikJ3QK55 433 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rab6aP35279 208 aaKnown RBP10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fam57aQ5ND56 257 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vgll4Q80V24 287 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r222Q8R269 308 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tusc2Q9WVF8 110 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cx3cr1Q9Z0D9 354 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tmem182B2RVY9 229 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Prrt2E9PUL5 346 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr427E9Q7E7 315 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 P01657 111 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 GzmaP11032 260 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Itgb2P11835 771 aaKnown RBP10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Egr3P43300 387 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Q3U1D9 316 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r237Q8R296 289 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1230Q8VG58 305 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 GhsrQ99P50 364 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Q9CQT6 229 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tspan32Q9JHH2 256 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tcf23Q9JLR5 209 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 9930021J03RikH3BKP8 2027 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ntsr1O88319 424 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tcf7Q00417 419 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms