RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 MioxQ9QXN5 285 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc25a31Q3V132 320 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr107Q7TRK4 309 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gprin3Q8BWS5 763 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Alpk2Q91ZB0 2144 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vsig2Q9Z109 328 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 CorinQ9Z319 1113 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 F830045P16RikQ8BJ95 487 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dync2li1Q8K0T2 351 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Trhr2Q9ERT2 382 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 EllO08856 602 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc5a12Q49B93 619 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wdr4Q9EP82 413 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr715bE9Q725 315 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Meox1P32442 253 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 RhodP97348 210 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Agbl4Q09LZ8 540 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Il22ra1Q80XZ4 581 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr203L7N205 307 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 CapzbP47757 277 aaKnown RBP15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Clec18aQ7TSQ1 534 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Zfp87Q8K2A4 540 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 TMEM121BQ99MX7 572 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 TsfmQ9CZR8 324 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Scml2B1AVB3 969 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Mettl4Q3U034 471 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc17a4Q5NCM1 492 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Cfhr1Q61406 343 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fam72aQ8BFZ8 149 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr214Q8VG27 320 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 SdhbQ9CQA3 282 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 DeddQ9Z1L3 318 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 CideaO70302 217 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc25a4P48962 298 aaKnown RBP14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ube2fbQ3UWQ3 185 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 ItpkcQ7TS72 678 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Anapc16Q9CPV2 110 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 4930553M12RikQ9CUH1 165 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gins3Q9CY94 216 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tnfsf13Q9D777 241 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tas2r105Q9JKT4 300 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r5B2RQT2 315 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 A630073D07RikE9PWS6 100 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Irf2bp1Q8R3Y8 584 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1408Q8VG32 310 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 1700069L16RikQ9D9H5 109 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fnd3c2A2AP83 941 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm14412A2ARR7 526 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 BatfO35284 125 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Pax5Q02650 391 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Npy6rQ61212 371 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Cpeb3Q7TN99 716 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm13723A0A1L1SUP2 315 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 VtnP29788 478 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Q8BTG6 205 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1512Q8VF72 313 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r51Q8VIC6 319 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ms4a6bQ99N09 244 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1158A2BHP7 313 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Lsm2O35900 95 aaKnown RBP14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 RimklaQ6PFX8 380 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gpr173Q6PI62 373 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ifna12Q80SS5 189 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1451Q8VFX5 310 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 MeiobQ9D513 470 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 L3mbtl4B1B1A0 621 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Zbtb25G3UW50 439 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr635K7N6B1 321 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1053L7MU59 313 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 St8sia5P70126 412 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ablim2Q8BL65 612 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tstd3Q9D0B5 157 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dock4P59764 1978 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr418A0A140T8J6 310 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr98Q8VFD9 309 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Timp4Q9JHB3 224 aa14.99□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rpl7a-ps5A0A140T8L3 268 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wdr25E9Q349 535 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Klf1P46099 358 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tcl1aP56280 116 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm7534Q3UU21 679 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Plk3Q60806 631 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r36Q8R2E3 305 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr763Q8VGC1 309 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr656Q8VGX9 329 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Sipa1l3G3X9J0 1776 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tbxa2rP30987 341 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gpm6aP35802 278 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ankrd9Q8BH83 326 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr709-ps1A0A140T8J9 307 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1245A0A1L1SQJ6 307 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc35e3Q6PGC7 313 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc25a18Q9DB41 320 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 CenpeQ6RT24 2474 aaKnown RBP14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Scd2P13011 358 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Neil2Q6R2P8 329 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wdfy2Q8BUB4 400 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Hoxd9P28357 339 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc16a11Q5NC32 447 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 ShfQ8CG80 238 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms