RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 Q8N2B8 174 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 ZNF565Q8N9K5 539 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 OR10K1Q8NGX5 313 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 GHSRQ92847 366 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 CREB3L1Q96BA8 519 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 S100A13Q99584 98 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 BARHL1Q9BZE3 327 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 PRSS22Q9GZN4 317 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 METTL9Q9H1A3 318 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 NCOR1P1Q9H4R4 102 aa20.29■□□□□ 0.84
VEGFA-232ENST00000640653 TRAV24A0A0B4J272 114 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 FAM172BPA6NC97 362 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 LEUTXA8MZ59 168 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 JUNBP17275 347 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-232ENST00000640653 GLP1RP43220 463 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 KCNJ3P48549 501 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 DEFA6Q01524 100 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 RIPK1Q13546 671 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 PIGYQ3MUY2 71 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 YIF1BQ5BJH7 314 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 OGFRL1Q5TC84 451 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-232ENST00000640653 DMKNQ6E0U4 476 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-232ENST00000640653 PAK1IP1Q9NWT1 392 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-232ENST00000640653 IL36GQ9NZH8 169 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 CNOT2Q9NZN8 540 aaKnown RBP20.28■□□□□ 0.84
VEGFA-232ENST00000640653 CKLFQ9UBR5 152 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 ING4Q9UNL4 249 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 MEGF8Q7Z7M0 2845 aa20.28■□□□□ 0.84
VEGFA-232ENST00000640653 MEIKINA0A087WXM9 373 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 TRBV5-5A0A0J9YX44 114 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 KBTBD11-OT1A0A1B0GTJ5 212 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 KCNAB3O43448 404 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 IGLV1-47P01700 117 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 CSTBP04080 98 aaKnown RBP20.27■□□□□ 0.84
VEGFA-232ENST00000640653 BRS3P32247 399 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 GDNFP39905 211 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 CEACAM3P40198 252 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 PRRX1P54821 245 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 TAS2R43P59537 309 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 C17orf58Q2M2W7 97 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 Q499Y3 187 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 OR13C5Q8NGS8 318 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 FAM110DQ8TAY7 271 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-232ENST00000640653 CFHR4Q92496 578 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 VCXQ9H320 206 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 ZNF286AQ9HBT8 521 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 KIF25Q9UIL4 384 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 ST3GAL6Q9Y274 331 aa20.27■□□□□ 0.84
VEGFA-232ENST00000640653 A0A087X0M5 115 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 A0A1B0GX30 115 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 FAM90A22PA8MWA6 464 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 CASQ2O14958 399 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-232ENST00000640653 CDRT1O95170 752 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 C21orf33P30042 268 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-232ENST00000640653 HLA-DRB5Q30154 266 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 ARSJQ5FYB0 599 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-232ENST00000640653 OSR2Q8N2R0 312 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 C11orf44Q8N8P7 122 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 ZFP41Q8N8Y5 198 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 ZNF485Q8NCK3 441 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 PCDHB16Q9NRJ7 776 aa20.26■□□□□ 0.83
VEGFA-232ENST00000640653 ZNF780AO75290 641 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-232ENST00000640653 GNAO1P09471 354 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 IGFBP3P17936 291 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-232ENST00000640653 NFYBP25208 207 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 PAX5Q02548 391 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 HABP2Q14520 560 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-232ENST00000640653 NHLRC3Q5JS37 347 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 C16orf82Q7Z2V1 217 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 LINC00596Q86U02 117 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 STX19Q8N4C7 294 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 ORAI1Q96D31 301 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 PGLYRP3Q96LB9 341 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 ZNF184Q99676 751 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-232ENST00000640653 SERTAD4Q9NUC0 356 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 CALYQ9NYX4 217 aa20.25■□□□□ 0.83
VEGFA-232ENST00000640653 TET2Q6N021 2002 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-232ENST00000640653 PEX14O75381 377 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 GPX5O75715 221 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 CGB3P0DN86 165 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 CGB7P0DN87 165 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 RBM11P57052 281 aaKnown RBP20.24■□□□□ 0.83
VEGFA-232ENST00000640653 RSBN1Q5VWQ0 802 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-232ENST00000640653 OR13A1Q8NGR1 328 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 OR9G1Q8NH87 305 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 CAPSLQ8WWF8 208 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 KIRREL1Q96J84 757 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 AKR1E2Q96JD6 320 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 DPCDQ9BVM2 203 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-232ENST00000640653 IFT22Q9H7X7 185 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 PLCXD1Q9NUJ7 323 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 PSORS1C1Q9UIG5 152 aa20.24■□□□□ 0.83
VEGFA-232ENST00000640653 BUB1B-PAK6H3BSN5 160 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 MYL12BO14950 172 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 XPNPEP2O43895 674 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 OR7C1O76099 320 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-232ENST00000640653 IL1AP01583 271 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 FSTP19883 344 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 SERPINA2P20848 420 aa20.23■□□□□ 0.83
VEGFA-232ENST00000640653 RPS11P62280 158 aaKnown RBP eCLIP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms