RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GLT8D1Q68CQ7 371 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 RBMS3Q6XE24 437 aaKnown RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 ZFAND2BQ8WV99 257 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 FCGR1BQ92637 280 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 FOXRED1Q96CU9 486 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 JMJD8Q96S16 334 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 DPCDQ9BVM2 203 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 KCNK15Q9H427 330 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 UBE2J1Q9Y385 318 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 TRDV1A0A1B0GX56 115 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 CCRL2O00421 344 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 RBP4P02753 201 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 MELTFP08582 738 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 PSMB9P28065 219 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 SAA4P35542 130 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 PAX5Q02548 391 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 MPV17LQ2QL34 196 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 SIGIRRQ6IA17 410 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 OR10K2Q6IF99 312 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 BAIAP2L2Q6UXY1 529 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 LINC00596Q86U02 117 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 MRPS24Q96EL2 167 aaKnown RBP21.74■■□□□ 1.07
VEGFA-231ENST00000640499 PCDHB16Q9NRJ7 776 aa21.74■■□□□ 1.07
VEGFA-231ENST00000640499 HOXA3O43365 443 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-231ENST00000640499 ARL6IP5O75915 188 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 VSIG8P0DPA2 414 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 MGMTP16455 207 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 COX7A1P24310 79 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 GDNFP39905 211 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 C17orf58Q2M2W7 97 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 SYT6Q5T7P8 510 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-231ENST00000640499 FAM216AQ8WUB2 273 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 Q96M66 194 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 SLITRK2Q9H156 845 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 RCC2Q9P258 522 aaKnown RBP21.73■■□□□ 1.07
VEGFA-231ENST00000640499 GHRLQ9UBU3 117 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 KIF25Q9UIL4 384 aa21.73■■□□□ 1.07
VEGFA-231ENST00000640499 CLDN34H7C241 214 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 TRIM77I1YAP6 450 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 LDLRAD2Q5SZI1 272 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 UTF1Q5T230 341 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 ZDHHC16Q969W1 377 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 FAM46BQ96A09 425 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 SELENOIQ9C0D9 397 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 NCOR1P1Q9H4R4 102 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 HEXA-AS1Q9H8Q6 139 aa21.72■■□□□ 1.07
VEGFA-231ENST00000640499 hCG_1809904A0A1W2PP81 198 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 A0A1W2PPE2 198 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 A0A1W2PR64 198 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 A0A1W2PRV1 198 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 MEIOCA2RUB1 952 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 CRTAPO75718 401 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-231ENST00000640499 HTR2CP28335 458 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 UNC119Q13432 240 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 LDLRAD3Q86YD5 345 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 OR13A1Q8NGR1 328 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 TAS2R3Q9NYW6 316 aa21.71■■□□□ 1.07
VEGFA-231ENST00000640499 TRGV10A0A0A0MS01 117 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 TRAV39A0A0B4J263 110 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 FUOMA2VDF0 154 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 GALP22466 123 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 PAX6P26367 422 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 MIDNQ504T8 468 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 ATAD3CQ5T2N8 411 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 PRAMEF5Q5TYX0 476 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 TRAPPC6BQ86SZ2 158 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 OR6M1Q8NGM8 313 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 BARHL1Q9BZE3 327 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 SESN1Q9Y6P5 492 aa21.7■■□□□ 1.06
VEGFA-231ENST00000640499 TRAV1-2A0A0B4J238 106 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 TMEM14DPA8MWL7 114 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 ODF3BA8MYP8 253 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 SLC17A2O00624 439 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 RNASE1P07998 156 aaKnown RBP21.69■■□□□ 1.06
VEGFA-231ENST00000640499 UBBP0CG47 229 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 IER3P46695 156 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 KCNJ3P48549 501 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 P2RY14Q15391 338 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 NEDD8Q15843 81 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 C22orf42Q6IC83 251 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 OR11H6Q8NGC7 330 aa21.69■■□□□ 1.06
VEGFA-231ENST00000640499 MEIKINA0A087WXM9 373 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A10PA6NDY2 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A18PA6NE21 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A16PA6NEW6 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A20PA6NIJ5 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A8PA6NJQ4 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A7PA6NKC0 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A22PA8MWA6 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A12PA8MX19 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A5PA8MXJ8 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A23PA8MXZ1 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 CLPXO76031 633 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 MPIG6BO95866 241 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 IGHV4-59P01825 116 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A15PP0C7V4 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A13PP0C7W8 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A14PP0C7W9 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FAM90A24PP0C7X0 464 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 OMGP23515 440 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms