RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ESPL1Q14674 2120 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 ZGRF1Q86YA3 2104 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 DLL1O00548 723 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 LILRA1O75019 489 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 NAPSAO96009 420 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 CGAP01215 116 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SP6Q3SY56 376 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SPATA46Q5T0L3 261 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SYNGR1O43759 233 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 AGFG2O95081 481 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
TRIM3-215ENST00000639856 AADACP22760 399 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 HERV-K104P61576 105 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 GNG3P63215 75 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 IGSF11Q5DX21 431 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 ZNF324BQ6AW86 544 aaPredicted RBP12.87□□□□□ -0.35
TRIM3-215ENST00000639856 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
TRIM3-215ENST00000639856 CXorf67Q86X51 503 aaPredicted RBP12.87□□□□□ -0.35
TRIM3-215ENST00000639856 ZNF573Q86YE8 665 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 CISD2Q8N5K1 135 aaKnown RBP12.87□□□□□ -0.35
TRIM3-215ENST00000639856 RSRP1Q9BUV0 290 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 Q9N2K0 584 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 PROCRQ9UNN8 238 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
TRIM3-215ENST00000639856 B8ZZF3 427 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 PPYP01298 95 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 TBC1D28Q2M2D7 210 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 FOXRED2Q8IWF2 684 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 WDR31Q8NA23 367 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 OR5T2Q8NGG2 359 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 PLK3Q9H4B4 646 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 TAS2R3Q9NYW6 316 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 NCOR2Q9Y618 2525 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 FGF16O43320 207 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 DEDDO75618 318 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 OR2T2Q6IF00 324 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 LIAT1Q6ZQX7 453 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 CCDC71LQ8N9Z2 235 aa12.86□□□□□ -0.35
TRIM3-215ENST00000639856 J3QW42 95 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 ZZEF1O43149 2961 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 WDR1O75083 606 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 PRKACAP17612 351 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 IL32P24001 234 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 IL24Q13007 206 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 SMCO1Q147U7 214 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 KRTCAP3Q53RY4 240 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 OR11L1Q8NGX0 322 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
TRIM3-215ENST00000639856 TMEM100Q9NV29 134 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 TAAR5O14804 337 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 SMPD2O60906 423 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 HKR1P10072 659 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 CA6P23280 308 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 DUSP1P28562 367 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 TDGF1P3P51864 188 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 PRR30Q53SZ7 412 aaPredicted RBP12.85□□□□□ -0.35
TRIM3-215ENST00000639856 LYZL2Q7Z4W2 148 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 C18orf12Q96KH6 178 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 SPACA1Q9HBV2 294 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 PCDHB10Q9UN67 800 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
TRIM3-215ENST00000639856 TK1P04183 234 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 GLI4P10075 376 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 LGI3Q8N145 548 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 STPG2Q8N412 459 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 TMED6Q8WW62 240 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 GTF3AQ92664 365 aaKnown RBP12.84□□□□□ -0.35
TRIM3-215ENST00000639856 PKIBQ9C010 78 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 ARID1AO14497 2285 aa12.84□□□□□ -0.35
TRIM3-215ENST00000639856 KIR2DS1A0A191URI9 304 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 H7C1Q1 480 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 HSPB6O14558 160 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 DIRAS3O95661 229 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 HOXD4P09016 255 aaPredicted RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 SCTP09683 121 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 HOXC12P31275 282 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 KIR2DS4P43632 304 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 TMPRSS3P57727 454 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 KIR2DS1Q14954 304 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms