RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 ZNF367Q7RTV3 350 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 LINC00596Q86U02 117 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 OR13D1Q8NGV5 346 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 C17orf50Q8WW18 174 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 MUL1Q969V5 352 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 MGLLQ99685 303 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 SLITRK2Q9H156 845 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 UBE2J1Q9Y385 318 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 POMT1Q9Y6A1 747 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 HSPB6O14558 160 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 MRPS14O60783 128 aaKnown RBP12.67□□□□□ -0.38
LINC00339-209ENST00000635450 NDUFA7O95182 113 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 GTF2F2P13984 249 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 CPEP16870 476 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 COX7A1P24310 79 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 PAX6P26367 422 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 SAA4P35542 130 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 DLX6P56179 175 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
LINC00339-209ENST00000635450 AESQ08117 197 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 INSL4Q14641 139 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 MIDNQ504T8 468 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 GLIPR1L1Q6UWM5 242 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 TREML4Q6UXN2 200 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 C11orf42Q8N5U0 333 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 OR4F5Q8NH21 305 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 PHYHIPQ92561 330 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 TMEM203Q969S6 136 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 FOXRED1Q96CU9 486 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-209ENST00000635450 UQCC2Q9BRT2 126 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
LINC00339-209ENST00000635450 BARHL1Q9BZE3 327 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 ING3Q9NXR8 418 aa12.67□□□□□ -0.38
LINC00339-209ENST00000635450 BTBD17A6NE02 478 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 OR7C1O76099 320 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-209ENST00000635450 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 SRMP19623 302 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 GLIPR1P48060 266 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 KCNJ3P48549 501 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-209ENST00000635450 MPV17LQ2QL34 196 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 NHLRC3Q5JS37 347 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 FAM27D1Q5T7N8 215 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 GLT8D1Q68CQ7 371 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 TCF23Q7RTU1 214 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 DYRK2Q92630 601 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
LINC00339-209ENST00000635450 ACOT13Q9NPJ3 140 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 OR6C3Q9NZP0 311 aa12.66□□□□□ -0.38
LINC00339-209ENST00000635450 TRAV24A0A0B4J272 114 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 ODAMA1E959 279 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 GEMIN2O14893 280 aaKnown RBP12.65□□□□□ -0.38
LINC00339-209ENST00000635450 SC5DO75845 299 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 ARL6IP5O75915 188 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 CLPXO76031 633 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 CRYBA1P05813 215 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 UCHL1P09936 223 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
LINC00339-209ENST00000635450 ATAD3CQ5T2N8 411 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 Q6ZSV7 163 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 LINC01006Q8NI28 216 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 CORO2AQ92828 525 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 COQ2Q96H96 371 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 CITED1Q99966 193 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 BEX1Q9HBH7 125 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 TAS2R3Q9NYW6 316 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 GHRLQ9UBU3 117 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 SESN1Q9Y6P5 492 aa12.65□□□□□ -0.38
LINC00339-209ENST00000635450 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
LINC00339-209ENST00000635450 A0A1W2PP11 408 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 CLPSL1A2RUU4 121 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 ARG1P05089 322 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 EMX1Q04741 257 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-209ENST00000635450 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF565Q8N9K5 539 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 SUMF2Q8NBJ7 301 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-209ENST00000635450 CST11Q9H112 138 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
LINC00339-209ENST00000635450 SPACA1Q9HBV2 294 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 LRRC42Q9Y546 428 aa12.64□□□□□ -0.39
LINC00339-209ENST00000635450 TGP01266 2768 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-209ENST00000635450 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-209ENST00000635450 UBBP0CG47 229 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 GABRA5P31644 462 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms