RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GLI4P10075 376 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 LYL1P12980 280 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 ZNF44P15621 663 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 IL15RAQ13261 267 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 TMEM187Q14656 261 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 ZNF146Q15072 292 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 MOB1BQ7L9L4 216 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 OR10C1Q96KK4 312 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 TLNRD1Q9H1K6 362 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 HES4Q9HCC6 221 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 SLC2A9Q9NRM0 540 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 AUP1Q9Y679 476 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 SH2D1BO14796 132 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 ZNF205O95201 554 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 SCTP09683 121 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 UBA52P62987 128 aaKnown RBP18.71■□□□□ 0.59
PNKP-220ENST00000627232 MZT1Q08AG7 82 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 LRTM2Q8N967 370 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 INO80EQ8NBZ0 244 aaPredicted RBP18.71■□□□□ 0.59
PNKP-220ENST00000627232 OR5T2Q8NGG2 359 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 OR4A4PQ8NGN8 299 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 SCARB1Q8WTV0 552 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 S100PBPQ96BU1 408 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 PIGMQ9H3S5 423 aa18.71■□□□□ 0.59
PNKP-220ENST00000627232 KANTRA0A1W2PQU2 76 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 BCL2L11O43521 198 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 TUSC2O75896 110 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 OR2H2O95918 312 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 IFNA21P01568 189 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 GRPP07492 148 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 HOXB5P09067 269 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 AP2S1P53680 142 aaPredicted RBP18.7■□□□□ 0.58
PNKP-220ENST00000627232 MUCL1Q96DR8 90 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 RNF126Q9BV68 326 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 PCDHB10Q9UN67 800 aa18.7■□□□□ 0.58
PNKP-220ENST00000627232 SLC33A1O00400 549 aaPredicted RBP18.69■□□□□ 0.58
PNKP-220ENST00000627232 PRRG2O14669 202 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 GFRA3O60609 400 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 KCNJ3P48549 501 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 FABP6P51161 128 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 RND3P61587 244 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 HLA-DRB3P79483 266 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 HERPUD1Q15011 391 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 PAN3Q58A45 887 aaKnown RBP18.69■□□□□ 0.58
PNKP-220ENST00000627232 RGS7BPQ6MZT1 257 aaPredicted RBP18.69■□□□□ 0.58
PNKP-220ENST00000627232 PRSS54Q6PEW0 395 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 Q6ZR03 302 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 C11orf53Q8IXP5 236 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 GAPTQ8N292 157 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 Q8NA96 180 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 CABLES2Q9BTV7 478 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 TMEM165Q9HC07 324 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 KIF25Q9UIL4 384 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 SPEF1Q9Y4P9 236 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 MPTX1A8MV57 137 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 OR5AC1P0C628 307 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 PET100P0DJ07 73 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 ZNF83P51522 516 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 ATXN7L3Q14CW9 347 aaPredicted RBP18.69■□□□□ 0.58
PNKP-220ENST00000627232 PHLDA2Q53GA4 152 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 C20orf204Q6ZNR8 217 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 GLS2Q9UI32 602 aa18.69■□□□□ 0.58
PNKP-220ENST00000627232 C1QTNF9BB2RNN3 333 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 BET1O15155 118 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 ZNF497Q6ZNH5 498 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 LIAT1Q6ZQX7 453 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 DOLPP1Q86YN1 238 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 DCUN1D4Q92564 292 aa18.68■□□□□ 0.58
PNKP-220ENST00000627232 SVILO95425 2214 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 IGKV1-6A0A0C4DH72 117 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 A8MXE2 369 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 NPIPB11E5RHQ5 1161 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 H0YIZ8 118 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 M0R1B8 84 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 SIRPB1O00241 398 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 GGNBP1Q5YKI7 109 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 LDLRAD3Q86YD5 345 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 LGI3Q8N145 548 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 CISD2Q8N5K1 135 aaKnown RBP18.67■□□□□ 0.58
PNKP-220ENST00000627232 ZNF565Q8N9K5 539 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 TUBD1Q9UJT1 453 aa18.67■□□□□ 0.58
PNKP-220ENST00000627232 SHANK1Q9Y566 2161 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 LEUTXA8MZ59 168 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 GPR31O00270 319 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 MPPED1O15442 326 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 CRYAAP02489 173 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 ZNF250P15622 560 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 LMO1P25800 156 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 GNRHRP30968 328 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 SRPXP78539 464 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 IAH1Q2TAA2 248 aaPredicted RBP18.66■□□□□ 0.58
PNKP-220ENST00000627232 PCSK4Q6UW60 755 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 MRGPRGQ86SM5 289 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 OR11L1Q8NGX0 322 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 PLPPR1Q8TBJ4 325 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 ST8SIA2Q92186 375 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 MRPL24Q96A35 216 aaKnown RBP18.66■□□□□ 0.58
PNKP-220ENST00000627232 MSI2Q96DH6 328 aaKnown RBP18.66■□□□□ 0.58
PNKP-220ENST00000627232 C18orf12Q96KH6 178 aa18.66■□□□□ 0.58
PNKP-220ENST00000627232 ARPC5LQ9BPX5 153 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms