RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SLC25A40Q8TBP6 338 aa16.31■□□□□ 0.2
MMP28-204ENST00000615136 TMED6Q8WW62 240 aa16.31■□□□□ 0.2
MMP28-204ENST00000615136 ACACAQ13085 2346 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 TAAR5O14804 337 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 GFRA3O60609 400 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 WDR1O75083 606 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 RHBDL1O75783 438 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 IFNA21P01568 189 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 FUT3P21217 361 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
MMP28-204ENST00000615136 TMEM187Q14656 261 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 TOMM40LQ969M1 308 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 MRPL24Q96A35 216 aaKnown RBP16.3■□□□□ 0.2
MMP28-204ENST00000615136 MOB3AQ96BX8 217 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 ABHD17AQ96GS6 310 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 HIST1H2AAQ96QV6 131 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 MPC1Q9Y5U8 109 aa16.3■□□□□ 0.2
MMP28-204ENST00000615136 DEDDO75618 318 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 IGKV3-15P01624 115 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 APOC3P02656 99 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 FAM157CP0CG43 387 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 HKR1P10072 659 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 UCP3P55916 312 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 FGF12P61328 243 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 PXDC1Q5TGL8 231 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 TMEM200AQ86VY9 491 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 C17orf78Q8N4C9 275 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 LRTM2Q8N967 370 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 RTN4IP1Q8WWV3 396 aaPredicted RBP16.29■□□□□ 0.2
MMP28-204ENST00000615136 ZNF71Q9NQZ8 489 aaPredicted RBP16.29■□□□□ 0.2
MMP28-204ENST00000615136 PROCRQ9UNN8 238 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 PIEZO2Q9H5I5 2752 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 IGHV3-64DA0A0J9YX35 117 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 CBR1P16152 277 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 FCGR2CP31995 323 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 MPV17P39210 176 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 UCP2P55851 309 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 ABCA11PQ4W5N1 156 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 SPACA3Q8IXA5 215 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 SPERTQ8NA61 448 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 OR1J1Q8NGS3 322 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 LHFPL5Q8TAF8 219 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 SUCNR1Q9BXA5 334 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 ZNF442Q9H7R0 627 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
MMP28-204ENST00000615136 NUDT19A8MXV4 375 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 OR5AC1P0C628 307 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 EIF5AP63241 154 aaKnown RBP16.28■□□□□ 0.2
MMP28-204ENST00000615136 ZNF273Q14593 569 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 SLC2A9Q9NRM0 540 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 WASF3Q9UPY6 502 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 TRAPPC2LH3BP13 241 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 HSPB6O14558 160 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 GLP1RP43220 463 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 FXYD4P59646 89 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 GNG3P63215 75 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 PSG7Q13046 419 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 ATRAIDQ6UW56 229 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 Q6ZS49 121 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 ARL11Q969Q4 196 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 BOD1Q96IK1 185 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 OR51I2Q9H344 312 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 TP53TG5Q9Y2B4 290 aa16.28■□□□□ 0.2
MMP28-204ENST00000615136 H0YL77 283 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 CECR9P0C854 216 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 SELEP16581 610 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 MRPL49Q13405 166 aaKnown RBP16.27■□□□□ 0.2
MMP28-204ENST00000615136 SMCO1Q147U7 214 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 MKXQ8IYA7 352 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 C1orf162Q8NEQ5 155 aaPredicted RBP16.27■□□□□ 0.2
MMP28-204ENST00000615136 EXTL1Q92935 676 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 LPAR3Q9UBY5 353 aa16.27■□□□□ 0.2
MMP28-204ENST00000615136 OR5B21A6NL26 309 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 TPD52L2O43399 206 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 PRKACAP17612 351 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 HOXC12P31275 282 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 SRSF7Q16629 238 aaKnown RBP eCLIP16.26■□□□□ 0.19
MMP28-204ENST00000615136 FOXRED2Q8IWF2 684 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 LRRC46Q96FV0 321 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 RSRP1Q9BUV0 290 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 OR2S2Q9NQN1 319 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 PRSS44E7EML9 344 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 MKRN2OSH3BPM6 223 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 J3QW42 95 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 K7EPK0 472 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 TSPAN4O14817 238 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 GAPDHP04406 335 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 RPL12P30050 165 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 RPL7L1Q6DKI1 246 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 ZNF474Q6S9Z5 364 aaPredicted RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 LIAT1Q6ZQX7 453 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 ZNF573Q86YE8 665 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 FAM71E2Q8N5Q1 922 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 KLF14Q8TD94 323 aaPredicted RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 C18orf12Q96KH6 178 aa16.26■□□□□ 0.19
MMP28-204ENST00000615136 RCC2Q9P258 522 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 MAP1BP46821 2468 aaKnown RBP16.26■□□□□ 0.19
MMP28-204ENST00000615136 SHANK1Q9Y566 2161 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms