RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SNX3O60493 162 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 DCTN3O75935 186 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 HOXB6P17509 224 aaKnown RBP13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 ATF1P18846 271 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 OVCH2Q7RTZ1 564 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 FAM220AQ7Z4H9 259 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 HS3ST5Q8IZT8 346 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 LEAP2Q969E1 77 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 RFT1Q96AA3 541 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 SPSB1Q96BD6 273 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 RNFT2Q96EX2 444 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 OPALINQ96PE5 141 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 COMMD4Q9H0A8 199 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 CALYQ9NYX4 217 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 IDI2-AS1Q9NZ38 188 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 PSG11Q9UQ72 335 aa13.6□□□□□ -0.23
CHMP4A-211ENST00000609024 BIRC6Q9NR09 4857 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 LOC107986453A0A1B0GWG9 222 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 PRKYO43930 277 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 GAPDHP04406 335 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 OR8U8P0C7N1 319 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 ATP6V1E1P36543 226 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 MS4A2Q01362 244 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 NXNL2Q5VZ03 156 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 TMEM65Q6PI78 240 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 BCDIN3DQ7Z5W3 292 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 GID4Q8IVV7 300 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 CCDC124Q96CT7 223 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 COQ2Q96H96 371 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 PPIL3Q9H2H8 161 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 RHOFQ9HBH0 211 aa13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 CHCHD3Q9NX63 227 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 EPPK1P58107 5090 aaKnown RBP13.59□□□□□ -0.23
CHMP4A-211ENST00000609024 SLC33A1O00400 549 aaPredicted RBP13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 HSPB6O14558 160 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 HSD17B6O14756 317 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 KDM4BO94953 1096 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 DIAPH2-AS1Q14236 149 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 OR5D18Q8NGL1 313 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 ASB9Q96DX5 294 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
CHMP4A-211ENST00000609024 SULT1C4O75897 302 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 IL1AP01583 271 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 OR2T7P0C7T2 308 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 FRMD6-AS1P0C7T7 363 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 PAN3Q58A45 887 aaKnown RBP13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 UTF1Q5T230 341 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 RDH10Q8IZV5 341 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 OR10H4Q8NGA5 316 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 OR1N2Q8NGR9 330 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 FGGYQ96C11 551 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 ISOC1Q96CN7 298 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 ADAT3Q96EY9 351 aaPredicted RBP13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 EAF1Q96JC9 268 aaPredicted RBP13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 CITED4Q96RK1 184 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 KIF25Q9UIL4 384 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 GNG8Q9UK08 70 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 ARL2BPQ9Y2Y0 163 aa13.57□□□□□ -0.24
CHMP4A-211ENST00000609024 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 A0A1W2PQL4 384 aaPredicted RBP13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 SAP30O75446 220 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 IL3RAP26951 378 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 REG1BP48304 166 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 SLC16A12Q6ZSM3 486 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 SSX6Q7RTT6 188 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 OR13A1Q8NGR1 328 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 RFESDQ8TAC1 157 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 TMEM163Q8TC26 289 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 CANT1Q8WVQ1 401 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 ISYNA1Q9NPH2 558 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 FAM118AQ9NWS6 357 aa13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 WARS2Q9UGM6 360 aaKnown RBP13.56□□□□□ -0.24
CHMP4A-211ENST00000609024 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 H0YJX3 145 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 M0R129 80 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 IGHG4P01861 327 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 TMEM225BP0DP42 221 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 SOX6P35712 828 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 ZNF616Q08AN1 781 aa13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 ZNF816Q0VGE8 651 aaPredicted RBP13.55□□□□□ -0.24
CHMP4A-211ENST00000609024 FHL3Q13643 280 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms