RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 DUSP21Q9H596 190 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 PCDHB16Q9NRJ7 776 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 OR6C3Q9NZP0 311 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 TPRKBQ9Y3C4 175 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 MINOS1-NBL1R4GNA1 71 aa13.93□□□□□ -0.18
HERC3-214ENST00000601319 VWFP04275 2813 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 PTGES3LE9PB15 166 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 H0YHG0 523 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 TSPAN9O75954 239 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 HTR3BO95264 441 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 GPR176Q14439 515 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 SPHARQ15513 63 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 LCE2DQ5TA82 110 aaPredicted RBP13.92□□□□□ -0.18
HERC3-214ENST00000601319 IZUMO2Q6UXV1 221 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 LHFPL4Q7Z7J7 247 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 OR10K1Q8NGX5 313 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 S100A13Q99584 98 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 NKX3-1Q99801 234 aaPredicted RBP13.92□□□□□ -0.18
HERC3-214ENST00000601319 PPIL3Q9H2H8 161 aaKnown RBP13.92□□□□□ -0.18
HERC3-214ENST00000601319 RAB18Q9NP72 206 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 ST3GAL6Q9Y274 331 aa13.92□□□□□ -0.18
HERC3-214ENST00000601319 A0A087X0M5 115 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 A0A1B0GX30 115 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 ZNF729A6NN14 1252 aaPredicted RBP13.91□□□□□ -0.18
HERC3-214ENST00000601319 PIN1P1O15428 100 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 CSTBP04080 98 aaKnown RBP13.91□□□□□ -0.18
HERC3-214ENST00000601319 CD34P28906 385 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 DYNLT3P51808 116 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 MPV17LQ2QL34 196 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 LDLRAD2Q5SZI1 272 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 Q6ZSV7 163 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 RTN4RL2Q86UN3 420 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 MS4A15Q8N5U1 240 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 MRPS24Q96EL2 167 aaKnown RBP13.91□□□□□ -0.18
HERC3-214ENST00000601319 NR1H4Q96RI1 486 aaPredicted RBP13.91□□□□□ -0.18
HERC3-214ENST00000601319 ING4Q9UNL4 249 aa13.91□□□□□ -0.18
HERC3-214ENST00000601319 HSPB6O14558 160 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 MMP23AO75900 390 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 GTF2F2P13984 249 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 CDK2P24941 298 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 PROK1P58294 105 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.18
HERC3-214ENST00000601319 GPR50Q13585 617 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 PRR31Q5SQ13 230 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 PRAMEF5Q5TYX0 476 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 RSBN1Q5VWQ0 802 aaPredicted RBP13.9□□□□□ -0.18
HERC3-214ENST00000601319 DYNAPQ8N1N2 210 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 SGCDQ92629 289 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 OR5M11Q96RB7 305 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 BARHL1Q9BZE3 327 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 RANBP3Q9H6Z4 567 aaPredicted RBP13.9□□□□□ -0.18
HERC3-214ENST00000601319 ZNF696Q9H7X3 374 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 LINC00574Q9H8X3 128 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 KIF25Q9UIL4 384 aa13.9□□□□□ -0.18
HERC3-214ENST00000601319 MRPS28Q9Y2Q9 187 aaKnown RBP13.9□□□□□ -0.18
HERC3-214ENST00000601319 KBTBD11-OT1A0A1B0GTJ5 212 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 A0A1W2PPK0 400 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 RGS10O43665 173 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 SC5DO75845 299 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 OR7C1O76099 320 aaPredicted RBP13.89□□□□□ -0.19
HERC3-214ENST00000601319 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 CGB3P0DN86 165 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 CGB7P0DN87 165 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 SERPINA2P20848 420 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 CRHBPP24387 322 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 PAX6P26367 422 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 MED22Q15528 200 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 C17orf58Q2M2W7 97 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 SLC22A6Q4U2R8 563 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 UNQ9370/PRO34162Q6UXP9 181 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 JAGN1Q8N5M9 183 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 OR4D6Q8NGJ1 314 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 OR4P4Q8NGL7 312 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 ZNF596Q8TC21 504 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 MUL1Q969V5 352 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 CITED1Q99966 193 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 UQCC2Q9BRT2 126 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 DPCDQ9BVM2 203 aaPredicted RBP13.89□□□□□ -0.19
HERC3-214ENST00000601319 ISYNA1Q9NPH2 558 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 TCF19Q9Y242 345 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 RNF114Q9Y508 228 aa13.89□□□□□ -0.19
HERC3-214ENST00000601319 MEIKINA0A087WXM9 373 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 MEGF11A6BM72 1044 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 GEMIN2O14893 280 aaKnown RBP13.88□□□□□ -0.19
HERC3-214ENST00000601319 MAS1P04201 325 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 HTR1DP28221 377 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 GLP1RP43220 463 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 SSX2Q16385 188 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 SLC35E4Q6ICL7 350 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 ABHD12Q8N2K0 398 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 ZNF565Q8N9K5 539 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 SUMF2Q8NBJ7 301 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 OR13A1Q8NGR1 328 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 PLPPR1Q8TBJ4 325 aa13.88□□□□□ -0.19
HERC3-214ENST00000601319 SPACA1Q9HBV2 294 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms