RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TMEM272A0A1B0GTI8 110 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 A0A1W2PPH5 198 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 hADV38S2A0JD32 116 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 M0R1W7 72 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 TOX4O94842 621 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 SLC2A2P11168 524 aaPredicted RBP15.91■□□□□ 0.14
UPF1-209ENST00000600310 NCS1P62166 190 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 AESQ08117 197 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 ZNF273Q14593 569 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 ATXN7L3Q14CW9 347 aaPredicted RBP15.91■□□□□ 0.14
UPF1-209ENST00000600310 KRBOX4Q5JUW0 171 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 C1orf122Q6ZSJ8 110 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 TPRX1Q8N7U7 411 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 NANPQ8TBE9 248 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 TBX15Q96SF7 602 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 BARHL1Q9BZE3 327 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 NAA50Q9GZZ1 169 aaKnown RBP15.91■□□□□ 0.14
UPF1-209ENST00000600310 LPAR5Q9H1C0 372 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 NCOR1P1Q9H4R4 102 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 DAPK2Q9UIK4 370 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 RAB22AQ9UL26 194 aa15.91■□□□□ 0.14
UPF1-209ENST00000600310 FN1P02751 2386 aaKnown RBP15.9■□□□□ 0.14
UPF1-209ENST00000600310 A0A0B4J203 849 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 PDCD6O75340 191 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 FSHBP01225 129 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 IL1AP01583 271 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 GLAP06280 429 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 FUT3P21217 361 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 SRP14P37108 136 aaKnown RBP15.9■□□□□ 0.14
UPF1-209ENST00000600310 GLIPR1P48060 266 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 BLMHQ13867 455 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 CTF1Q16619 201 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 RAB12Q6IQ22 244 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 TCF23Q7RTU1 214 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 FAM89BQ8N5H3 189 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 Q8N7P7 452 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 PCGF1Q9BSM1 259 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 PEX16Q9Y5Y5 336 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 LINC00312Q9Y6C7 94 aa15.9■□□□□ 0.14
UPF1-209ENST00000600310 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 ODAMA1E959 279 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 MCRIP1C9JLW8 97 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 TMEM127O75204 238 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 CCL3L1P16619 93 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 RAB6AP20340 208 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 RPS19P39019 145 aaKnown RBP15.89■□□□□ 0.13
UPF1-209ENST00000600310 DLX6P56179 175 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 VBP1P61758 197 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 RBM39Q14498 530 aaKnown RBP15.89■□□□□ 0.13
UPF1-209ENST00000600310 RSBN1Q5VWQ0 802 aaPredicted RBP15.89■□□□□ 0.13
UPF1-209ENST00000600310 BRICD5Q6PL45 260 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 C11orf42Q8N5U0 333 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 PLPPR1Q8TBJ4 325 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 CORO2AQ92828 525 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 NICN1Q9BSH3 213 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 ING3Q9NXR8 418 aa15.89■□□□□ 0.13
UPF1-209ENST00000600310 SONP18583 2426 aaKnown RBP15.89■□□□□ 0.13
UPF1-209ENST00000600310 ZNF728P0DKX0 622 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 SRD5A1P18405 259 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 PRTN3P24158 256 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 CHATP28329 748 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 SERPINB10P48595 397 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 PLA2G7Q13093 441 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 KLF17Q5JT82 389 aaPredicted RBP15.88■□□□□ 0.13
UPF1-209ENST00000600310 SLC35E4Q6ICL7 350 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 CROCCP3Q8IVE0 287 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 PTX4Q96A99 478 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 NEDD4LQ96PU5 975 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 METTL8Q9H825 291 aaKnown RBP15.88■□□□□ 0.13
UPF1-209ENST00000600310 UNKLQ9H9P5 680 aaKnown RBP15.88■□□□□ 0.13
UPF1-209ENST00000600310 OR6C3Q9NZP0 311 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 KIF25Q9UIL4 384 aa15.88■□□□□ 0.13
UPF1-209ENST00000600310 UBE2J1Q9Y385 318 aaPredicted RBP15.88■□□□□ 0.13
UPF1-209ENST00000600310 TRGV10A0A0A0MS01 117 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 C17orf98A8MV24 154 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 FAM157CP0CG43 387 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 BLVRBP30043 206 aaPredicted RBP15.87■□□□□ 0.13
UPF1-209ENST00000600310 EFNB2P52799 333 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 SCAND1P57086 179 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 FAM189A2Q15884 450 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 IDNKQ5T6J7 187 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 VMO1Q7Z5L0 202 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 NEK7Q8TDX7 302 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 ZNF714Q96N38 554 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 TAS2R3Q9NYW6 316 aa15.87■□□□□ 0.13
UPF1-209ENST00000600310 MEIKINA0A087WXM9 373 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 TRAV40A0A0B4J280 105 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 hCG_1809904A0A1W2PP81 198 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 A0A1W2PPE2 198 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 A0A1W2PR64 198 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 A0A1W2PRV1 198 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 TMEM30CPA0ZSE6 113 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 MEX3AA1L020 520 aaKnown RBP15.86■□□□□ 0.13
UPF1-209ENST00000600310 FOXI3A8MTJ6 420 aaPredicted RBP15.86■□□□□ 0.13
UPF1-209ENST00000600310 SOCS1O15524 211 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 CA11O75493 328 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 RBP4P02753 201 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 SNRPBP14678 240 aaKnown RBP15.86■□□□□ 0.13
UPF1-209ENST00000600310 NKAPLQ5M9Q1 402 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 TRAPPC6BQ86SZ2 158 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms