RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 P2RX3P56373 397 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 RAB11BQ15907 218 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 GDPD3Q7L5L3 318 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 RTN4RL2Q86UN3 420 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 KCNG3Q8TAE7 436 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 MRI1Q9BV20 369 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 NCOR1P1Q9H4R4 102 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 STEAP1Q9UHE8 339 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 TMEM272A0A1B0GTI8 110 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 M0R1W7 72 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 AIPO00170 330 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 TOX4O94842 621 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 ARSBP15848 533 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 PRTN3P24158 256 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 EFNB2P52799 333 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 TMEM50BP56557 158 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 EDDM3BP56851 147 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
VRK3-219ENST00000600137 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
VRK3-219ENST00000600137 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 PAN3Q58A45 887 aaKnown RBP11.26□□□□□ -0.61
VRK3-219ENST00000600137 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 FAM185AQ8N0U4 392 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 GAPTQ8N292 157 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 PPP1R35Q8TAP8 253 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 NANPQ8TBE9 248 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 PCGF1Q9BSM1 259 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
VRK3-219ENST00000600137 CST11Q9H112 138 aa11.26□□□□□ -0.61
VRK3-219ENST00000600137 A0A1W2PQ09 198 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 RNASEK-C17orf49H0YIS7 233 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 HSPB6O14558 160 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 MMP23AO75900 390 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 ZNF728P0DKX0 622 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 FUT3P21217 361 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 CHATP28329 748 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 RPS19P39019 145 aaKnown RBP11.25□□□□□ -0.61
VRK3-219ENST00000600137 KCNJ3P48549 501 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 MXD1Q05195 221 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 ATXN7L3Q14CW9 347 aaPredicted RBP11.25□□□□□ -0.61
VRK3-219ENST00000600137 CTF1Q16619 201 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 METTL11BQ5VVY1 283 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 VMO1Q7Z5L0 202 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 PRIMA1Q86XR5 153 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 BCL6BQ8N143 479 aaPredicted RBP11.25□□□□□ -0.61
VRK3-219ENST00000600137 TMEM59Q9BXS4 323 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 ZNF69Q9UC07 566 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
VRK3-219ENST00000600137 IGHV3OR16-10A0A075B7F0 116 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 ODAMA1E959 279 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 SOCS1O15524 211 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 MT-ND4P03905 459 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 GLAP06280 429 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 SRD5A1P18405 259 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 HNF1AP20823 631 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 NCS1P62166 190 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 KRBOX4Q5JUW0 171 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 ATAD3CQ5T2N8 411 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 SLC35E4Q6ICL7 350 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 SFXN4Q6P4A7 337 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 DYRK2Q92630 601 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 LIN7BQ9HAP6 207 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 SIRT7Q9NRC8 400 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 PEX16Q9Y5Y5 336 aa11.24□□□□□ -0.61
VRK3-219ENST00000600137 ATRQ13535 2644 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 TRAV39A0A0B4J263 110 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 PDCD6O75340 191 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 GABARAPO95166 117 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 SRP14P37108 136 aaKnown RBP11.23□□□□□ -0.61
VRK3-219ENST00000600137 GDNFP39905 211 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 VBP1P61758 197 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 KLRD1Q13241 179 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 UTF1Q5T230 341 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 GPR107Q5VW38 600 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 Q6ZPA2 131 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 C9orf139Q6ZV77 190 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 OR13A1Q8NGR1 328 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 LHX4Q969G2 390 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 PTX4Q96A99 478 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 SULT4A1Q9BR01 284 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms