RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 NOS1APO75052 506 aaPredicted RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 OR7C1O76099 320 aaPredicted RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 TFF1P04155 84 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 ACAA1P09110 424 aaPredicted RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 CD3GP09693 182 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 CHATP28329 748 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 CEBPDP49716 269 aaPredicted RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 IKZF1Q13422 519 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 IL13RA2Q14627 380 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 CDNFQ49AH0 187 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 FAM201AQ5SY85 155 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 TRIQKQ629K1 86 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 ACP7Q6ZNF0 438 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 C6orf201Q7Z4U5 140 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 GCSAMQ8N6F7 178 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 C19orf18Q8NEA5 215 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 OR52I2Q8NH67 350 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 SMIM4Q8WVI0 70 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 TRIM63Q969Q1 353 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 SLC6A7Q99884 636 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 NUDT16L1Q9BRJ7 211 aaKnown RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 PECRQ9BY49 303 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
UPF1-208ENST00000600012 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 PPP1R3CQ9UQK1 317 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 IGHV3OR15-7A0A075B7D8 119 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 LINC00854A0A1B0GVQ3 168 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 GABARAPH6UMI1 98 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.53□□□□□ -0.72
UPF1-208ENST00000600012 GSTZ1O43708 216 aaPredicted RBP10.53□□□□□ -0.72
UPF1-208ENST00000600012 PDCD6O75340 191 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 FCER2P06734 321 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 PRSS3P35030 304 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 SCN1BQ07699 218 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 ZNF181Q2M3W8 571 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 MPV17LQ2QL34 196 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 ATAD3CQ5T2N8 411 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 STEAP3Q658P3 488 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 BRICD5Q6PL45 260 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 LYSMD2Q8IV50 215 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 Q8TCH9 128 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 DYRK2Q92630 601 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 NEDD4LQ96PU5 975 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 RNF7Q9UBF6 113 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 OR14J1Q9UGF5 321 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 KCNK7Q9Y2U2 307 aa10.53□□□□□ -0.72
UPF1-208ENST00000600012 UBE2QL1A1L167 161 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 SIRPB1O00241 398 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 HSPB6O14558 160 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 TPPPO94811 219 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ZNF205O95201 554 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 IRF2P14316 349 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ZNF44P15621 663 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FPR2P25090 351 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 CFHR2P36980 270 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 GNG2P59768 71 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 MRPS10P82664 201 aaKnown RBP10.52□□□□□ -0.73
UPF1-208ENST00000600012 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 AWAT1Q58HT5 328 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 Q6P435 159 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FIP1L1Q6UN15 594 aaKnown RBP10.52□□□□□ -0.73
UPF1-208ENST00000600012 DCDC5Q6ZRR9 648 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 LINC00596Q86U02 117 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ZDHHC22Q8N966 263 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 C15orf40Q8WUR7 153 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 FCAMRQ8WWV6 532 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ST8SIA4Q92187 359 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
UPF1-208ENST00000600012 PALMDQ9NP74 551 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ESM1Q9NQ30 184 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.52□□□□□ -0.73
UPF1-208ENST00000600012 PLEKHJ1Q9NW61 149 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 AK3Q9UIJ7 227 aa10.52□□□□□ -0.73
UPF1-208ENST00000600012 ISPDA4D126 451 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 DEGS1O15121 323 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 SSX5O60225 188 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 OR2H2O95918 312 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 HAND1O96004 215 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms