RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 HAND1O96004 215 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 MT-CO3P00414 261 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 RPLP1P05386 114 aaKnown RBP10.43□□□□□ -0.74
SCN8A-208ENST00000599343 CEACAM3P40198 252 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 WNT5AP41221 380 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 RIGQ13278 110 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 DMKNQ6E0U4 476 aaPredicted RBP10.43□□□□□ -0.74
SCN8A-208ENST00000599343 STARD4Q96DR4 205 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 MEGF10Q96KG7 1140 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 FSCN3Q9NQT6 498 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 A0A1B0GUL6 1792 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 TRAV39A0A0B4J263 110 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 CRHP06850 196 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 TMIGD3P0DMS9 266 aaPredicted RBP10.43□□□□□ -0.74
SCN8A-208ENST00000599343 C1QL3Q5VWW1 255 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 DEFB124Q8NES8 71 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 ZNF71Q9NQZ8 489 aaPredicted RBP10.43□□□□□ -0.74
SCN8A-208ENST00000599343 SSC5DA1L4H1 1573 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 IGHV1OR21-1A0A087WYE8 117 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 IGSF23A1L1A6 192 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 OOEPA6NGQ2 149 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 ZNF250P15622 560 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 SLC23A3Q6PIS1 610 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 WFDC3Q8IUB2 231 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 VN1R17PQ8TDU5 208 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 SLC52A3Q9NQ40 469 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 APCSP02743 223 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 OR2I1PQ8NGU4 316 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 OR4X1Q8NH49 305 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 RPS4Y2Q8TD47 263 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
SCN8A-208ENST00000599343 LOC389332A0A1B0GUA5 103 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCN8A-208ENST00000599343 IL11RAQ14626 422 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 RTP5Q14D33 572 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 PWWP2BQ6NUJ5 590 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 BHLHA15Q7RTS1 189 aaPredicted RBP10.42□□□□□ -0.74
SCN8A-208ENST00000599343 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 VSTM2LQ96N03 204 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 OR4C12Q96R67 309 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 DLX1P56177 255 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SKP2Q13309 424 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 RPP25Q9BUL9 199 aaKnown RBP10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SMOC1Q9H4F8 434 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 VSIG4Q9Y279 399 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 NKX2-6A6NCS4 301 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SNURFLB1AK76 121 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 H3BQ15 152 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 GCSHP23434 173 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SOX8P57073 446 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SSPNQ14714 243 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 C10orf113Q5VZT2 155 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 C9orf62Q8N4C0 152 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 MRGPRFQ96AM1 343 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 IGLV3-16A0A075B6K0 115 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 CORTO00230 105 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 CDIPTO14735 213 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 KCNAB3O43448 404 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 ANGPTL4Q9BY76 406 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 IGHV3OR15-7A0A075B7D8 119 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 CXCL10P02778 98 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 OR10J1P30954 320 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 SRD5A2P31213 254 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 HMGA2P52926 109 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 TMEM255AQ5JRV8 349 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 LYZL2Q7Z4W2 148 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 NEU3Q9UQ49 428 aa10.42□□□□□ -0.74
SCN8A-208ENST00000599343 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
SCN8A-208ENST00000599343 F2RL2O00254 374 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 SMPD2O60906 423 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 C21orf58P58505 322 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 BPIFA4PQ86YQ2 179 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 RASL11BQ9BPW5 248 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MPC1Q9Y5U8 109 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 DEDDO75618 318 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MDKP21741 143 aaPredicted RBP10.41□□□□□ -0.74
SCN8A-208ENST00000599343 FAHD2BQ6P2I3 314 aaPredicted RBP10.41□□□□□ -0.74
SCN8A-208ENST00000599343 OR4D11Q8NGI4 311 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 OR6X1Q8NH79 312 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 OR5R1Q8NH85 324 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 FAHD2AQ96GK7 314 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 RAB1BQ9H0U4 201 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MIXL1Q9H2W2 232 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 CACNA1CQ13936 2221 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MAST2Q6P0Q8 1798 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 A6NDN8 102 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 CTDSPLO15194 276 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 CD226Q15762 336 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 VN1R4Q7Z5H5 301 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 LSMEM1Q8N8F7 131 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 ADTRPQ96IZ2 230 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 GABRG3Q99928 467 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 TINAGQ9UJW2 476 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms